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Protein Overview: gi|125548775

General Information:
Name(s) found: gi|125548775 [NCBI NR]
Description(s) found:
  • gi|125548775|gb|EAY94597.1| hypothetical protein OsI_16374 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 389 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGGVGEEGK QQPHLVLAHK LFLLSHPDVD DLAKVDLRAD VLAAVKSDDM ASLYESLGAG  60
   61 GVLETDAALL AEMRGRIEEE IRKLDEKIAD AEENLGESEV REAHLAKSLY FIRVGEKEKA 120
  121 LEQLKVTEGK TVAVGQKMDL VFHTLQIGFF YMDFDLISKS IDKAKKLFEE GGDWERKNRL 180
  181 KVYEGLYCMA TRNFKKAASL FLDSISTFTT YELFPYDTFI FYTVLTSVIS LDRVSLKAKV 240
  241 VDAPEILAVI GKVPHLSEFL NSLYNCQYKS FFAAFSGLTE QIKLDRYLQP HFRYYMREVR 300
  301 TVVYSQFLES YKSVTMEAMA SAFGVTVDFI DLELSRFIAA GKLHCKIDKV ACVLETNRPD 360
  361 ARNAFYQATI KQGDFLLNRI QKLSRVIDL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..169] PSI-BLAST 5.69897 Crystal structure of an 8 repeat consensus TPR superhelix (trigonal crystal form)
    2 View Details [170..297] MSA 1.448996 View MSA. No confident structure predictions are available.
    3 View Details [298..389] PSI-BLAST 8.69897 Solution structure of the PCI domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle