Protein Overview: gi|157817412, gi...

General Information:
Name(s) found:	gi\|157817412 [NCBI NR] gi\|149024190 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|157817412\|ref\|NP_001100105.1\| AT rich interactive domain 1A (SWI-like) [Rattus norvegicus] [NCBI NR] gi\|149024190\|gb\|EDL80687.1\| AT rich interactive domain 1A (Swi1 like) (predicted) [Rattus norvegicus] [NCBI NR] Ensembl_locations(Chr-bp):5-33224333 [hmr_yeast5_DM3-1_pombe.fasta] AT rich interactive domain 1A (Swi1 like) [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] AT rich interactive domain 1A (Swi1 like) (predicted) [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] AT rich interactive domain 1A (SWI-like) [Rattus norvegicus] [NCBI-RefSeq_human-rat_na_04-07-2009_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Arid1a AT rich interactive domain 1A [rat-ipi-250309-contam.fasta] AT rich interactive domain 1A (Swi1 like) (Predicted) OS=Rattus norvegicus GN=Arid1a PE=4 SV=2 [20141208_RAT.fasta]
Organism:	Rattus norvegicus
Length:	1911 amino acids
Gene Ontology:
Cellular Component:	nucleus [UNKNOWN] SWI/SNF complex [UNKNOWN] [NOT]nucleolus [UNKNOWN] intracellular [IEA]
Biological Process:	glucocorticoid receptor signaling pathway [UNKNOWN] chromatin organization [UNKNOWN] androgen receptor signaling pathway [UNKNOWN] estrogen receptor signaling pathway [UNKNOWN]
Molecular Function:	DNA binding [IEA] protein binding [UNKNOWN] transcription activator activity [UNKNOWN]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQMGKMRPQ PYGGTNPYSQ QQGPPSGPQQ GHGYPGQPYG SQTPQRYPMT MQGRAQSAMG  60
   61 SLSYAQQIPP YGQQGPSAYG QQGQTPYYNQ QSPHPQQQQQ PPYSQQPPSQ TPHAQPSYQQ 120
  121 QPQTQQPQLQ SSQPPYSQQP SQPPHQQSQT PYPSQQSTTQ QHPQSQPPYS QPQAQAPYQQ 180
  181 QQPQQPASST LSQQAAYPQP QPQQSQQTAY SQQRFPPPQE LSQDSFGSQA SSAPSMTSSK 240
  241 GGQEDMNLSL QSRPSSLPDL SGSIDDLPMG TEGALSPGVS TSGISSSQGE QSNPAQSPFS 300
  301 PHTSPHLPGI RGPSPSPVGS PASVAQSRSG PLSPAAVPGN QMPPRPPSGQ SDSIMHPSMN 360
  361 QSSIAQDRGY MQRNPQMPQY TSPQPGSALS PRQPSGGQMH SGMGSYQQNS MGSYGPQGSQ 420
  421 YGPQGGYPRQ PNYNALPNAN YPSAGMAGSM NPLGAGGQMH GQPGIPPYGT LPPGRMTHAS 480
  481 MGNRPYGPNM ANMPPQVGSG MCPPPGGMNR KTQESAVAMH VAANSIQNRP PGYPNMNQGG 540
  541 IMGTGPPYGQ GINSMAGMIN PQGPPYPMGG TMANNSAGMA ASPEMMGLGD VKLTPATKMN 600
  601 NKADGTPKTE SKSKKSSSST TTNEKITKLY ELGGEPERKM WVDRYLAFTE EKAMGMTNLP 660
  661 AVGRKPLDLY RLYVSVKEIG GLTQVNKNKK WRELATNLNV GTSSSAASSL KKQYIQCLYA 720
  721 FECKIERGED PPPDIFAAAD SKKSQPKIQP PSPAGSGSMQ GPQTPQSTSS SMAEGGDLKP 780
  781 PTPASTPHSQ IPPLPGMRSN SVGIQDAFPD GSEPTFQKRN SMTPNPGYQP SMNTSDMMGR 840
  841 MSYEPNKDPY GGMRKAPGSD PFMSSGQGPN GGMGDPYSRA AGPGLGNVAM GPRQHYPYGG 900
  901 PYDRVRTEPG IGPEGNMGTG APQPNLMPST PDSGMYSPSR YPPQQQQQQQ QQQQQQQQQQ 960
  961 QRHDSYGNQF STQGTPSSSP FPSQQTTMYQ QQQQQNYKRP MDGTYGPPAK RHEGELYSVP1020
 1021 YSTGQGQPQQ QQLPAAQSQS ASQPQAAQPS PQQDVYNQYS NAYPATATAA TERRPAGGPQ1080
 1081 NQFPFQFGRD RVSAPPGSNA QQNMPPQMMG GPIQASAEVA QQGTMWQGRN DMTYNYANRQ1140
 1141 NTGSAPQGPA YHGVNRTDEM LHTDQRANHE GPWPSHGTRQ PPYGPSAPVP PMTRPPPSNY1200
 1201 QPPPSMQNHI PQVSSPAPLP RPMENRTSPS KSPFLHSGMK MQKAGPPVPA SHIAPTPVQP1260
 1261 PMIRRDITFP PGSVEATQPV LKQRRRLTMK DIGTPEAWRV MMSLKSGLLA ESTWALDTIN1320
 1321 ILLYDDNSIM TFNLSQLPGL LELLVEYFRR CLIEIFGILK EYEVGDPGQR TLLDPGRLTK1380
 1381 VSSPAPTEEE EEEEHVDPKL EEEEEEGVEN DEEMAFLGKD KPPSEKSEEK LVSKFDKLPV1440
 1441 KIVQKNDPFV VDCSDKLGRV QEFDSGLLHW RIGGGDTTEH IQTHFESKIE LLPSRPCVPS1500
 1501 PVPPRKHVTT VEGTPGTTEQ EGPPPDGLPE KRITATMDDM LSTRSSTLTD EGTKSTEANK1560
 1561 ESSKFPFGIS PAQSHRNIKI LEDEPHSKDE TPLCTLLDWQ DSLAKRCVCV SNAIRSLSFV1620
 1621 PGNDFEMSKH PGLLLILGKL ILLHHKHPER KQAPLTYEKE EEQDQGVSCD KVEWWWDCLE1680
 1681 MLRENTLVTL ANISGQLDLS PYPESICLPV LDGLLHWAVC PSAEAQDPFS TLGPNAVLSP1740
 1741 QRLVLETLSK LSIQDNNVDL ILATPPFSRL EKLYSTMVRF LSDRKNPVCR EMAVVLLANL1800
 1801 AQGDSLAARA IAVQKGSIGN LLGFLEDSLA ATQFQQSQAS LLHMQSPPFE PTSVDMMRRA1860
 1861 ARALLALAKV DENHSEFTLY ESRLLDISVS PLMNSLVSQV ICDVLFLIGQ S

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.94

Protein Overview: gi|157817412, gi...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: