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Protein Overview: gi|124113314, gi...

General Information:
Name(s) found: gi|153217777 [NCBI NR]
gi|124113314 [NCBI NR]
Description(s) found:
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  • gi|153217777|ref|ZP_01951420.1| ribosomal protein S11 [Vibrio cholerae 1587] [NCBI NR]
  • gi|124113314|gb|EAY32134.1| ribosomal protein S11 [Vibrio cholerae 1587] [NCBI NR]
    • Organism: Vibrio cholerae 1587
    Length: 129 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKQPTRARK RVRKQVADGV AHIHASFNNT IVTITDRQGN ALAWATAGGS GFRGSRKSTP  60
   61 FAAQVAAERC AEMAKEYGLK NLEVMVKGPG PGRESTVRAL NAAGFRITNI VDATPIPHNG 120
  121 CRPPKKRRV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..129] PSI-BLAST 47.154902 No description for 1vs5K was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.83351366956976 bayes_pls_golite062009
  • structural molecule activity
    		•  9.25292687983044 bayes_pls_golite062009
  • RNA binding
    		•  1.52264031918826 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.983215686081669 bayes_pls_golite062009
  • binding
    		•  0.558121720172199 bayes_pls_golite062009
  • rRNA binding
    		•  0.357032493028 bayes_pls_golite062009
  • catalytic activity
    		•  0.249767694451989 bayes_pls_golite062009
  • translation regulator activity
    		•  0.17520676474539 bayes_pls_golite062009
  • protein binding
    		•  0.013467373576568 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle