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Protein Overview: DDX42_MOUSE

General Information:
Name(s) found: DDX42_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|74146847|dbj|BAE41388.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|157838001|ref|NP_082350.3| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Mus musculus] [NCBI NR]
  • gi|123796460|sp|Q810A7.3|DDX42_MOUSE RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD box protein 42 [NCBI NR]
  • gi|123242261|emb|CAM23778.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Mus musculus] [NCBI NR]
  • ATP-dependent RNA helicase DDX42 OS=Mus musculus GN=Ddx42 PE=1 SV=3 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):11-107060575 RIKEN cDNA 1810047H21 gene [hmr_yeast5_DM3-1_pombe.fasta]
  • Tax_Id=10090 Activated spleen cDNA, RIKEN full-length enriched library, clone:F830007J01 product:DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, full insert sequence [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • ATP-dependent RNA helicase DDX42 (DEAD box protein 42) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Ddx42 Isoform 1 of ATP-dependent RNA helicase DDX42 [mouse-ipi-250309-contam.fasta]
  • Ddx42 protein [Mus musculus] [nr-271106-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Ddx42 Isoform 1 of ATP-dependent RNA helicase DDX42 ENSMUSG00000020705 IPI00329839 IPI00830514 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • ATP-dependent RNA helicase DDX42 [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00329839.7|SWISS-PROT:Q810A7-1|TREMBL:Q8VE45;Q9CTM9|ENSEMBL:ENSMUSP00000021046|REFSEQ:NP_082350|VEGA:OTTMUSP00000003274 Tax_Id=10090 Gene_Symbol=Ddx42 Isoform 1 of ATP-dependent RNA helicase DDX42 [ipi.MOUSE.fasta.20090209]
  • Isoform 1 of ATP-dependent RNA helicase DDX42 OS=Mus musculus GN=Ddx42 [011711_HMR.fasta]
  • sp|Q810A7|DDX42_MOUSE ATP-dependent RNA helicase DDX42 OS=Mus musculus GN=Ddx42 PE=1 SV=3 [uniprot.sptr.mouse.20130102]
    • Organism: Mus musculus
    Length: 929 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWNKGGPGT KRGFGFGGFA ISAGKKEEAK LPQQSHSAFG AASSSSGFGK SAPPQLPSFY  60
   61 KIGSKRANFD EENAYFEDEE EDSSNVDLPY IPAENSPTRQ QFHSKPADSD SDDDPLEAFM 120
  121 AEVEDQAARD MKRLEEKDKE RKNVKGIRDD IEEEDDQEAY FRYMAENPTA GVVQEEEEDN 180
  181 LEYDSDGNPI APSKKIIDPL PPIDHSEIDY PPFEKNFYNE HEEITNLTPQ QLIDLRHKLN 240
  241 LRVSGAAPPR PGSSFAHFGF DEQLMHQIRK SEYTQPTPIQ CQGVPVALSG RDMIGIAKTG 300
  301 SGKTAAFIWP MLIHIMDQKE LEPGDGPIAV IVCPTRELCQ QIHAECKRFG KAYNLRSVAV 360
  361 YGGGSMWEQA KALQEGAEIV VCTPGRLIDH VKKKATNLQR VSYLVFDEAD RMFDMGFEYQ 420
  421 VRSIASHVRP DRQTLLFSAT FRKKIEKLAR DILIDPIRVV QGDIGEANED VTQIVEILHS 480
  481 GPSKWNWLTR RLVEFTSSGS VLLFVTKKAN AEELASNLKQ EGHNLGLLHG DMDQSERNKV 540
  541 ISDFKKKDIP VLVATDVAAR GLDIPSIKTV INYDVARDID THTHRIGRTG RAGEKGVAYT 600
  601 LLTPKDSNFA GDLVRNLEGA NQHVSKELLD LAMQNAWFRK SRFKGGKGKK LNIGGGGLGY 660
  661 RERPGLGSEN SDRGNNNNVM SNYEAYKPST GAMGDRLTAM KAAFQSQYKS HFVAASLSNQ 720
  721 KAGTSSAGAS GWTSAGSLNS VPTNSAQQGH NSPDNPMTSS TKNIPGFNNS GNISSAPVTY 780
  781 PSIGAQGVNN TASGNNSREG IGGGNGKRER YTENRGGSRH SHGDGGNRHG DGGRHGDGYR 840
  841 YPESGSRHTD GHRHGETRHG GSAGRHGESR GANDGRNGES RKEGFNRENK MDPKVDSSRM 900
  901 DKVDSKTDKT PDGFAVPEPP KRKKSRWDS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle