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Protein Overview: TM38B_MOUSE

General Information:
Name(s) found: TM38B_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|81906039|sp|Q9DAV9.1|TM38B_MOUSE RecName: Full=Trimeric intracellular cation channel type B; Short=TRIC-B; Short=TRICB; AltName: Full=Transmembrane protein 38B; AltName: Full=Mitsugumin-33B [NCBI NR]
  • gi|21312532|ref|NP_082329.1| transmembrane protein 38B [Mus musculus] [NCBI NR]
  • gi|15029714|gb|AAH11072.1| Transmembrane protein 38B [Mus musculus] [NCBI NR]
  • gi|148670324|gb|EDL02271.1| transmembrane protein 38B [Mus musculus] [NCBI NR]
  • gi|147842910|dbj|BAF62542.1| Mitsugumin33B [Mus musculus] [NCBI NR]
  • gi|12838065|dbj|BAB24068.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|123858254|emb|CAM21467.1| transmembrane protein 38B [Mus musculus] [NCBI NR]
  • Trimeric intracellular cation channel type B OS=Mus musculus GN=Tmem38b PE=1 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):4-53004529 1600017F22Rik protein [hmr_yeast5_DM3-1_pombe.fasta]
  • hypothetical protein D4Ertd89e [HMR_022704-rand.fasta]
  • Mus musculus adult female placenta cDNA, RIKEN full-length enriched library, clone:1600017F22 product:DNA segment, Chr 4, ERATO Doi 89, expressed Histone H4, full insert sequence [ipi.MOUSE.v3.06.fasta]
  • hypothetical protein D4Ertd89e [Mus musculus]gi|15029714|gb|AAH11072.1| Hypothetical protein D4Ertd89e [Mus musculus]gi|12838065|dbj|BAB24068.1| unnamed protein product [Mus musculus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 Bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830120O19 product:hypothetical protein, full insert sequence [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_028053) RIKEN cDNA 1600017F22 [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • transmembrane protein 38B [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Tax_Id=10090 Mus musculus adult female placenta cDNA, RIKEN full-length enriched library, clone:1600017F22 product:DNA segment, Chr 4, ERATO Doi 89, expressed Histone H4, full insert sequence [EBI-IPI_mouse_3.06_05-10-2005_origrev_con.fasta]
  • Trimeric intracellular cation channel type B (TRIC-B) (TRICB) (Transmembrane protein 38B) (Mitsugumin-33B) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Mitsugumin33B [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Transmembrane protein 38B [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 MUS MUSCULUS ADULT FEMALE PLACENTA CDNA, RIKEN FULL-LENGTH ENRICHED LIBRARY, CLONE:1600017F22 PRODUCT:DNA SEGMENT, CHR 4, ERATO DOI 89, EXPRESSED HISTONE H4, FULL INSERT SEQUENCE [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Tmem38b Trimeric intracellular cation channel type B [mouse-ipi-250309-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Tmem38b Bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830120O19 product:hypothetical protein, full insert sequence [zeeyong.fasta]
  • Tax_Id=10090 Gene_Symbol=Tmem38b Trimeric intracellular cation channel type B ENSMUSG00000028420 IPI00119084 IPI00648055 IPI00649700 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • trimeric intracellular cation channel type B [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00119084.3|SWISS-PROT:Q9DAV9|ENSEMBL:ENSMUSP00000030127|REFSEQ:NP_082329|VEGA:OTTMUSP00000007422 Tax_Id=10090 Gene_Symbol=Tmem38b Trimeric intracellular cation channel type B [ipi.MOUSE.fasta.20090209]
  • Trimeric intracellular cation channel type B OS=Mus musculus GN=Tmem38b [011711_HMR.fasta]
  • Trimeric intracellular cation channel type B OS=Mus musculus GN=Tmem38b PE=2 SV=1 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta]
  • sp|Q9DAV9|TM38B_MOUSE Trimeric intracellular cation channel type B OS=Mus musculus GN=Tmem38b PE=2 SV=1 [uniprot.sptr.mouse.20130102]
    • Organism: Mus musculus
    Length: 292 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYPWDDLTL AFSRTSMFPF FDIAHYLVSV MALKQRPGAV AAAWNNPLAS WLSAMLHCFG  60
   61 GGILSCMLLA ESPLKFLTNH TNILLASSIW YIVFFCPRDL VSQGYSYQPI QFLAAGMKEV 120
  121 TRTWKIVGGV SDANSYYRNA WIVMIVVGWA RGAGGAVVTA CEQLLKGDWK PEGDEWLKMS 180
  181 FPCKITLLGS IMFTFQHTRH LAISKHDLMF LYTIFLVTIK VTMMMTKDTA VTLTPFEDTL 240
  241 TRMLFGRRQQ QQFSSSEKKT EVKPSSNGSA SSASKRGAEP SGGAKRHAKK ED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..292] Pfam 155.823909 No description for PF05197.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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