Protein Overview: RTCB_MOUSE

General Information:
Name(s) found:	RTCB_MOUSE [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|81880226\|sp\|Q99LF4.1\|CV028_MOUSE RecName: Full=UPF0027 protein C22orf28 homolog [NCBI NR] gi\|74219639\|dbj\|BAE29587.1\| unnamed protein product [Mus musculus] [NCBI NR] gi\|74219466\|dbj\|BAE29508.1\| unnamed protein product [Mus musculus] [NCBI NR] gi\|74219227\|dbj\|BAE26747.1\| unnamed protein product [Mus musculus] [NCBI NR] gi\|74219184\|dbj\|BAE26729.1\| unnamed protein product [Mus musculus] [NCBI NR] gi\|74212476\|dbj\|BAE30981.1\| unnamed protein product [Mus musculus] [NCBI NR] gi\|74207239\|dbj\|BAE30808.1\| unnamed protein product [Mus musculus] [NCBI NR] gi\|74185421\|dbj\|BAE30183.1\| unnamed protein product [Mus musculus] [NCBI NR] gi\|74181588\|dbj\|BAE30059.1\| unnamed protein product [Mus musculus] [NCBI NR] gi\|74142478\|dbj\|BAE31991.1\| unnamed protein product [Mus musculus] [NCBI NR] gi\|37722161\|gb\|AAR02005.1\| focal adhesion associated protein [Mus musculus] [NCBI NR] gi\|21703842\|ref\|NP_663397.1\| hypothetical protein LOC28088 [Mus musculus] [NCBI NR] gi\|148689481\|gb\|EDL21428.1\| DNA segment, Chr 10, Wayne State University 52, expressed [Mus musculus] [NCBI NR] gi\|13096991\|gb\|AAH03288.1\| DNA segment, Chr 10, Wayne State University 52, expressed [Mus musculus] [NCBI NR] tRNA-splicing ligase RtcB homolog OS=Mus musculus GN=Rtcb PE=1 SV=1 [Swiss-Prot] UPF0027 protein C22orf28 homolog OS=Mus musculus GN=D10Wsu52e PE=2 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):10-85465454 Hypothetical 55.2 kDa protein [hmr_yeast5_DM3-1_pombe.fasta] hypothetical protein D10Wsu52e [HMR_022704-rand.fasta] Hypothetical protein D10Wsu52e [ipi.MOUSE.v3.06.fasta] p55 [Mus musculus]gi\|21703842\|ref\|NP_663397.1\| hypothetical protein D10Wsu52e [Mus musculus]gi\|50926851\|gb\|AAH78924.1\| P55 [Rattus norvegicus]gi\|13096991\|gb\|AAH03288.1\| Hypothetical protein D10Wsu52e [Mus musculus] [nrdb_11152004_Chlamydomonas] (NM_145422) similar to Hypothetical 55.2 kDa protein F16A11.2 in chromosome I [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] hypothetical protein LOC28088 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta] Tax_Id=10090 Hypothetical protein D10Wsu52e [EBI-IPI_mouse_3.06_05-10-2005_origrev_con.fasta] UPF0027 protein C22orf28 homolog [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] focal adhesion associated protein [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] DNA segment, Chr 10, Wayne State University 52, expressed [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10090 HYPOTHETICAL PROTEIN D10WSU52E [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Tax_Id=10090 Gene_Symbol=D10Wsu52e UPF0027 protein C22orf28 homolog [mouse-ipi-250309-contam.fasta] p55 [Mus musculus] [nr-271106-contam.fasta] Tax_Id=10090 Gene_Symbol=D10Wsu52e UPF0027 protein C22orf28 homolog ENSMUSG00000001783 IPI00116850 [IPIxENS.MOUSE_plus_REVERSE.fasta] IPI:IPI00116850.3\|SWISS-PROT:Q99LF4\|TREMBL:Q3TJ01\|ENSEMBL:ENSMUSP00000001834\|REFSEQ:NP_663397\|VEGA:OTTMUSP00000027012 Tax_Id=10090 Gene_Symbol=D10Wsu52e UPF0027 protein C22orf28 homolog [ipi.MOUSE.fasta.20090209] UPF0027 protein C22orf28 homolog OS=Mus musculus GN=D10Wsu52e [011711_HMR.fasta] tRNA-splicing ligase RtcB homolog OS=Mus musculus GN=D10Wsu52e [122011_mus.fasta] Tax_Id=10090 Gene_Symbol=D10Wsu52e tRNA-splicing ligase RtcB homolog [EBI-IPI_mouse_2_08-18-2011_reversed.fasta] tRNA-splicing ligase RtcB homolog OS=Mus musculus GN=D10Wsu52e PE=2 SV=1 [uniprot-mouse-120502.fasta] sp\|Q99LF4\|RTCB_MOUSE tRNA-splicing ligase RtcB homolog OS=Mus musculus GN=D10Wsu52e PE=2 SV=1 [uniprot.sptr.mouse.20130102] tRNA-splicing ligase RtcB homolog OS=Mus musculus GN=Rtcb PE=2 SV=1 [MOUSE.fasta.20131015]
Organism:	Mus musculus
Length:	505 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRNYNDELQ FLDKINKNCW RIKKGFVPNM QVEGVFYVND ALEKLMFEEL RNACRGGGVG  60
   61 GFLPAMKQIG NVAALPGIVH RSIGLPDVHS GYGFAIGNMA AFDMNDPEAV VSPGGVGFDI 120
  121 NCGVRLLRTN LDESDVQPVK EQLAQAMFDH IPVGVGSKGV IPMNAKDLEE ALEMGVDWSL 180
  181 REGYAWAEDK EHCEEYGRML QADPNKVSPR AKKRGLPQLG TLGAGNHYAE IQVVDEIFNE 240
  241 YAAKKMGIDH KGQVCVMIHS GSRGLGHQVA TDALVAMEKA MKRDKIIVND RQLACARIAS 300
  301 PEGQDYLKGM AAAGNYAWVN RSSMTFLTRQ AFAKVFNTTP DDLDLHVIYD VSHNIAKVEQ 360
  361 HVVDGKERTL LVHRKGSTRA FPPHHPLIAV DYQLTGQPVL IGGTMGTCSY VLTGTEQGMT 420
  421 ETFGTTCHGA GRALSRAKSR RNLDFQDVLD KLADMGIAIR VASPKLVMEE APESYKNVTD 480
  481 VVNTCHDAGI SKKAIKLRPI AVIKG

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Protein Overview: RTCB_MOUSE

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: