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Protein Overview: TPPC1_MOUSE

General Information:
Name(s) found: TPPC1_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|66730565|ref|NP_001019377.1| trafficking protein particle complex 1 [Mus musculus] [NCBI NR]
  • gi|62901412|sp|Q5NCF2.1|TPPC1_MOUSE RecName: Full=Trafficking protein particle complex subunit 1 [NCBI NR]
  • gi|56800278|emb|CAI35255.1| trafficking protein particle complex 1 [Mus musculus] [NCBI NR]
  • gi|148678544|gb|EDL10491.1| trafficking protein particle complex 1, isoform CRA_b [Mus musculus] [NCBI NR]
  • gi|119390393|pdb|2J3T|C Chain C, The Crystal Structure Of The Bet3-Trs33-Bet5-Trs23 Complex. [NCBI NR]
  • gi|109732467|gb|AAI15922.1| Trappc1 protein [Mus musculus] [NCBI NR]
  • gi|109732318|gb|AAI15819.1| Trappc1 protein [Mus musculus] [NCBI NR]
  • Trafficking protein particle complex subunit 1 OS=Mus musculus GN=Trappc1 PE=1 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):11-69983505 [hmr_yeast5_DM3-1_pombe.fasta]
  • similar to trafficking protein particle complex 1; MUM2 protein [HMR_022704-rand.fasta]
  • Trafficking protein particle complex subunit 1 [ipi.MOUSE.v3.06.fasta]
  • Tax_Id=10090 Trafficking protein particle complex subunit 1 [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • trafficking protein particle complex 1 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Chain C, The Crystal Structure Of The Bet3-Trs33-Bet5-Trs23 Complex. [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • trafficking protein particle complex 1, isoform CRA_b [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Trappc1 protein [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Trappc1 Trafficking protein particle complex subunit 1 [mouse-ipi-250309-contam.fasta]
  • novel Sybindin-like family domain-containing protein [Mus musculus] [nr-271106-contam.fasta]
  • trafficking protein particle complex subunit 1 [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00275577.3|SWISS-PROT:Q5NCF2|TREMBL:Q14BF8|ENSEMBL:ENSMUSP00000099661;ENSMUSP00000099662|REFSEQ:NP_001019377|VEGA:OTTMUSP00000006180;OTTMUSP00000006181 Tax_Id=10090 Gene_Symbol=Trappc1 Trafficking protein particle complex subunit 1 [ipi.MOUSE.fasta.20090209]
  • Trafficking protein particle complex subunit 1 OS=Mus musculus GN=Trappc1 [011711_HMR.fasta]
  • sp|Q5NCF2|TPPC1_MOUSE Trafficking protein particle complex subunit 1 OS=Mus musculus GN=Trappc1 PE=1 SV=1 [uniprot.sptr.mouse.20130102]
  • tr|Q14BF8|Q14BF8_MOUSE Trafficking protein particle complex 1, isoform CRA_b OS=Mus musculus GN=Trappc1 PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • Trafficking protein particle complex 1, isoform CRA_b OS=Mus musculus GN=Trappc1 PE=2 SV=1 [mouse-uniprot-290313-contam.fasta]
  • Isoform of Q5NCF2, Trafficking protein particle complex 1, isoform CRA_b OS=Mus musculus GN=Trappc1 PE=1 SV=1 [MOUSE.fasta.20160308]
    • Organism: Mus musculus
    Length: 145 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVHNLYLFD RNGVCLHYSE WHRKKQAGIP KEEEYKLMYG MLFSIRSFVS KMSPLDMKDG  60
   61 FLSFQTSRYK LHYYETPTGI KVVMNTDLGV GPIRDVLHHI YSALYVEFVV KNPLCPLGQT 120
  121 VQSELFRSRL DSYVRSLPFF SARAG

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. NIT2_MOUSE TPPC1_MOUSE gi|145579947, gi... gi|165760848 gi|168177328 gi|1827804 gi|18655560 gi|20150417 gi|21465813, gi|... gi|215794651, gi... gi|3212471, gi|3... gi|37926733, gi|... gi|4139755 gi|60594092 gi|62738080, gi|... gi|71041775 gi|809361 gi|9955246

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..145] PSI-BLAST 48.69897 No description for 2j3tC was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle