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Protein Overview: TM50B_MOUSE

General Information:
Name(s) found: TM50B_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|74228983|dbj|BAE21959.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74220528|dbj|BAE31480.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74217921|dbj|BAE41957.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74212562|dbj|BAE31021.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74198955|dbj|BAE30696.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74196269|dbj|BAE33034.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74186363|dbj|BAE42953.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74178101|dbj|BAE29839.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|24636294|sp|Q9D1X9.1|TM50B_MOUSE RecName: Full=Transmembrane protein 50B [NCBI NR]
  • gi|21758104|dbj|BAC05243.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|21313410|ref|NP_084294.1| transmembrane protein 50B [Mus musculus] [NCBI NR]
  • gi|148671876|gb|EDL03823.1| transmembrane protein 50B, isoform CRA_b [Mus musculus] [NCBI NR]
  • gi|13436023|gb|AAH04841.1| Transmembrane protein 50B [Mus musculus] [NCBI NR]
  • gi|12861726|dbj|BAB32266.1| unnamed protein product [Mus musculus] [NCBI NR]
  • Transmembrane protein 50B OS=Mus musculus GN=Tmem50b PE=1 SV=1 [Swiss-Prot]
  • (Q9D1X9) Membrane protein C21orf4 homolog [Swiss-Prot]
  • Ensembl_locations(Chr-bp):16-92219755 Membrane protein C21orf4 homolog [hmr_yeast5_DM3-1_pombe.fasta]
  • RIKEN cDNA B230114J08 [HMR_022704-rand.fasta]
  • Membrane protein C21orf4 homolog [ipi.MOUSE.v3.06.fasta]
  • similar to RIKEN cDNA B230114J08 [Rattus norvegicus]gi|21313410|ref|NP_084294.1| RIKEN cDNA B230114J08 [Mus musculus]gi|13436023|gb|AAH04841.1| RIKEN cDNA B230114J08 [Mus musculus]gi|21758104|dbj|BAC05243.1| unnamed protein product [Mus musculus]gi|24 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 Transmembrane protein 50B [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_030018) RIKEN cDNA B230114J08 [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • transmembrane protein 50B [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Tax_Id=10090 Membrane protein C21orf4 homolog [EBI-IPI_mouse_3.06_05-10-2005_origrev_con.fasta]
  • Transmembrane protein 50B [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • transmembrane protein 50B, isoform CRA_b [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Transmembrane protein 50B [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 MEMBRANE PROTEIN C21ORF4 HOMOLOG [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Tmem50b Transmembrane protein 50B [mouse-ipi-250309-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Tmem50b Transmembrane protein 50B ENSMUSG00000022964 IPI00134382 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • IPI:IPI00134382.1|SWISS-PROT:Q9D1X9|ENSEMBL:ENSMUSP00000023686|REFSEQ:NP_084294|VEGA:OTTMUSP00000021556 Tax_Id=10090 Gene_Symbol=Tmem50b Transmembrane protein 50B [ipi.MOUSE.fasta.20090209]
  • Transmembrane protein 50B OS=Mus musculus GN=Tmem50b [011711_HMR.fasta]
  • Transmembrane protein 50B OS=Mus musculus GN=Tmem50b PE=2 SV=1 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta]
  • sp|Q9D1X9|TM50B_MOUSE Transmembrane protein 50B OS=Mus musculus GN=Tmem50b PE=2 SV=1 [uniprot.sptr.mouse.20130102]
    • Organism: Mus musculus
    Length: 158 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGFLDNFRW PECECIDWSE RRNTVASVVA GILFFTGWWI MIDAAVVYPK PEQLNHAFHT  60
   61 CGVFSTLAFF MINAVSNAQV RGDSYESGCL GRTGARVWLF IGFMLMFGSL IASMWILFGA 120
  121 YVTQNIDVYP GLAVFFQNAL IFFSTLIYKF GRTEELWA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] Pfam 106.091515 No description for PF05255.2 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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