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Protein Overview: CPSF5_MOUSE

General Information:
Name(s) found: CPSF5_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|94370578|ref|XP_985931.1| PREDICTED: similar to nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus musculus] [NCBI NR]
  • gi|94369444|ref|XP_979655.1| PREDICTED: similar to nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus musculus] [NCBI NR]
  • gi|82800565|ref|XP_892945.1| PREDICTED: similar to nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus musculus] [NCBI NR]
  • gi|81880378|sp|Q9CQF3.1|CPSF5_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor subunit 5; AltName: Full=Nucleoside diphosphate-linked moiety X motif 21; Short=Nudix motif 21 [NCBI NR]
  • gi|74227593|dbj|BAE35655.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74151031|dbj|BAE27645.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|60551046|gb|AAH90834.1| Nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus musculus] [NCBI NR]
  • gi|148679165|gb|EDL11112.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus musculus] [NCBI NR]
  • gi|14198424|gb|AAH08270.1| Nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus musculus] [NCBI NR]
  • gi|13386106|ref|NP_080899.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus musculus] [NCBI NR]
  • gi|12859636|dbj|BAB31718.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|12847971|dbj|BAB27778.1| unnamed protein product [Mus musculus] [NCBI NR]
  • Cleavage and polyadenylation specificity factor subunit 5 OS=Mus musculus GN=Nudt21 PE=1 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):3-20761880 3110048P04Rik protein [hmr_yeast5_DM3-1_pombe.fasta]
  • cleavage and polyadenylation specific factor 5; cleavage and polyadenylation specific factor 5, 25 kD subunit [HMR_022704-rand.fasta]
  • Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110048P04 product:cleavage and polyadenylation specific factor 5, 25 kD subunit, full insert sequence [ipi.MOUSE.v3.06.fasta]
  • similar to cleavage and polyadenylation specific factor 5; cleavage and polyadenylation specific factor 5, 25 kD subunit [Rattus norvegicus]gi|13386106|ref|NP_080899.1| cleavage and polyadenylation specific factor 5 [Mus musculus]gi|53733680|gb|AAH84013 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 Cleavage and polyadenylation specificity factor 5 [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_026623) cleavage and polyadenylation specific factor 5, 25 kD subunit; RIKEN cDNA 3110048P04 gene [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • PREDICTED: similar to nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Tax_Id=10090 Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110048P04 product:cleavage and polyadenylation specific factor 5, 25 kD subunit, full insert sequence [EBI-IPI_mouse_3.06_05-10-2005_origrev_con.fasta]
  • Cleavage and polyadenylation specificity factor subunit 5 (Nucleoside diphosphate-linked moiety X motif 21) (Nudix motif 21) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 MUS MUSCULUS 13 DAYS EMBRYO HEAD CDNA, RIKEN FULL-LENGTH ENRICHED LIBRARY, CLONE:3110048P04 PRODUCT:CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR 5, 25 KD SUBUNIT, FULL INSERT SEQUENCE [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Nudt21 Cleavage and polyadenylation specificity factor subunit 5 [mouse-ipi-250309-contam.fasta]
  • Cleavage and polyadenylation specificity factor 5 (Nucleoside diphosphate-linked moiety X motif 21) (Nudix motif 21) [nr-271106-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Nudt21;EG665094 Cleavage and polyadenylation specificity factor 5 [zeeyong.fasta]
  • Tax_Id=10090 Gene_Symbol=Nudt21 Cleavage and polyadenylation specificity factor subunit 5 ENSMUSG00000031754 IPI00132473 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • cleavage and polyadenylation specificity factor subunit 5 [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00132473.3|SWISS-PROT:Q9CQF3|TREMBL:Q9CZQ0|ENSEMBL:ENSMUSP00000034204|REFSEQ:NP_080899 Tax_Id=10090 Gene_Symbol=Nudt21 Cleavage and polyadenylation specificity factor subunit 5 [ipi.MOUSE.fasta.20090209]
  • Cleavage and polyadenylation specificity factor subunit 5 OS=Mus musculus GN=Nudt21 [011711_HMR.fasta]
  • Cleavage and polyadenylation specificity factor subunit 5 OS=Mus musculus GN=Nudt21 PE=2 SV=1 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta]
  • sp|Q9CQF3|CPSF5_MOUSE Cleavage and polyadenylation specificity factor subunit 5 OS=Mus musculus GN=Nudt21 PE=2 SV=1 [uniprot.sptr.mouse.20130102]
    • Organism: Mus musculus
    Length: 227 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVVPPNRSQ TGWPRGVNQF GNKYIQQTKP LTLERTINLY PLTNYTFGTK EPLYEKDSSV  60
   61 AARFQRMREE FDKIGMRRTV EGVLIVHEHR LPHVLLLQLG TTFFKLPGGE LNPGEDEVEG 120
  121 LKRLMTEILG RQDGVLQDWV IDDCIGNWWR PNFEPPQYPY IPAHITKPKE HKKLFLVQLQ 180
  181 EKALFAVPKN YKLVAAPLFE LYDNAPGYGP IISSLPQLLS RFNFIYN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..227] PSI-BLAST 108.0 No description for 2cl3A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle