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Protein Overview: SMN_MOUSE

General Information:
Name(s) found: SMN_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|74204183|dbj|BAE39854.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|6755580|ref|NP_035550.1| survival motor neuron 1 [Mus musculus] [NCBI NR]
  • gi|5932001|gb|AAD56757.1|AF131205_1 survival of motor neuron protein [Mus musculus] [NCBI NR]
  • gi|3114879|emb|CAA73356.1| survival motor neuron [Mus musculus] [NCBI NR]
  • gi|28175331|gb|AAH45158.1| Smn1 protein [Mus musculus] [NCBI NR]
  • gi|2498925|sp|P97801.1|SMN_MOUSE RecName: Full=Survival motor neuron protein [NCBI NR]
  • gi|220941799|emb|CAX15796.1| survival motor neuron 1 [Mus musculus] [NCBI NR]
  • gi|1946333|gb|AAC53144.1| survival motor neuron [Mus musculus] [NCBI NR]
  • gi|1857114|gb|AAC53057.1| survival motor neuron [NCBI NR]
  • gi|148668499|gb|EDL00818.1| survival motor neuron 1, isoform CRA_a [Mus musculus] [NCBI NR]
  • Survival motor neuron protein OS=Mus musculus GN=Smn1 PE=1 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):13-96510893 Survival motor neuron protein [hmr_yeast5_DM3-1_pombe.fasta]
  • survival motor neuron [HMR_022704-rand.fasta]
  • Survival motor neuron protein [ipi.MOUSE.v3.06.fasta]
  • Smn1 protein [Mus musculus]gi|6755580|ref|NP_035550.1| survival motor neuron 1 [Mus musculus]gi|5932001|gb|AAD56757.1| survival of motor neuron protein [Mus musculus]gi|2498925|sp|P97801|SMN_MOUSE Survival motor neuron proteingi|1857114|gb|AAC53057.1| [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 Survival motor neuron protein [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_011420) survival motor neuron [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • survival motor neuron 1 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • survival motor neuron 1, isoform CRA_a [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Smn1 protein [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • survival motor neuron [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • survival of motor neuron protein [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 SURVIVAL MOTOR NEURON PROTEIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Smn1 Survival motor neuron protein [mouse-ipi-250309-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Smn1 Survival motor neuron protein ENSMUSG00000021645 IPI00129918 IPI00515683 IPI00515731 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • survival motor neuron protein [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00129918.1|SWISS-PROT:P97801|TREMBL:Q3UMN7;Q549F9;Q5PXT3;Q8CH69;Q9JIC6;Q9JIC8|ENSEMBL:ENSMUSP00000022147|REFSEQ:NP_035550|VEGA:OTTMUSP00000045374 Tax_Id=10090 Gene_Symbol=Smn1 Survival motor neuron protein [ipi.MOUSE.fasta.20090209]
  • Survival motor neuron protein OS=Mus musculus GN=Smn1 [011711_HMR.fasta]
  • sp|P97801|SMN_MOUSE Survival motor neuron protein OS=Mus musculus GN=Smn1 PE=1 SV=1 [uniprot.sptr.mouse.20130102]
  • tr|Q549F9|Q549F9_MOUSE Survival motor neuron 1 OS=Mus musculus GN=Smn1 PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • Survival motor neuron 1, isoform CRA_a OS=Mus musculus GN=Smn1 PE=2 SV=1 [mouse-uniprot-290313-contam.fasta]
  • Putative uncharacterized protein OS=Mus musculus GN=Smn1 PE=2 SV=1 [UniProt_mouse_01-27-2011_reversed.fasta]
  • Isoform of P97801, Survival motor neuron 1, isoform CRA_a OS=Mus musculus GN=Smn1 PE=1 SV=1 [MOUSE.fasta.20160308]
    • Organism: Mus musculus
    Length: 288 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMGSGGAGS EQEDTVLFRR GTGQSDDSDI WDDTALIKAY DKAVASFKHA LKNGDICETP  60
   61 DKPKGTARRK PAKKNKSQKK NATTPLKQWK VGDKCSAVWS EDGCIYPATI TSIDFKRETC 120
  121 VVVYTGYGNR EEQNLSDLLS PTCEVANSTE QNTQENESQV STDDSEHSSR SLRSKAHSKS 180
  181 KAAPWTSFLP PPPPMPGSGL GPGKPGLKFN GPPPPPPLPP PPFLPCWMPP FPSGPPIIPP 240
  241 PPPISPDCLD DTDALGSMLI SWYMSGYHTG YYMGFRQNKK EGKCSHTN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..76] MSA 1.116972 View MSA. No confident structure predictions are available.
    2 View Details [77..164] PSI-BLAST 23.30103 Survival motor neuron protein 1, smn
    3 View Details [165..288] FFAS03 1.1 Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle