YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|57977132, gi|...

General Information:
Name(s) found: gi|74221407 [NCBI NR]
gi|57977132 [NCBI NR]
gi|30578384 [NCBI NR]
gi|26332845 [NCBI NR]
gi|18857929 [NCBI NR]
gi|13938645 [NCBI NR]
gi|123858445 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|74221407|dbj|BAE42179.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|57977132|dbj|BAD88411.1| mVAM6 [Mus musculus] [NCBI NR]
  • gi|30578384|ref|NP_849182.1| vacuolar protein sorting 39 isoform 2 [Mus musculus] [NCBI NR]
  • gi|26332845|dbj|BAC30140.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|18857929|gb|AAL79767.1|AF281051_1 VPS39 short isoform [Mus musculus] [NCBI NR]
  • gi|13938645|gb|AAH07479.1| Vacuolar protein sorting 39 (yeast) [Mus musculus] [NCBI NR]
  • gi|123858445|emb|CAM19516.1| vacuolar protein sorting 39 (yeast) [Mus musculus] [NCBI NR]
  • Ensembl_locations(Chr-bp):2-121936128 Splice isoform 2 of Q8R5L3 Vam6/Vps39-like protein [hmr_yeast5_DM3-1_pombe.fasta]
  • vacuolar protein sorting 39 isoform 2; Vam6/Vps39-like [HMR_022704-rand.fasta]
  • Splice Isoform 2 of Vam6/Vps39-like protein [ipi.MOUSE.v3.06.fasta]
  • vacuolar protein sorting 39 isoform 2 [Mus musculus]gi|13938645|gb|AAH07479.1| Vacuolar protein sorting 39, isoform 2 [Mus musculus]gi|18857929|gb|AAL79767.1| VPS39 short isoform [Mus musculus]gi|26332845|dbj|BAC30140.1| unnamed protein product [Mus mu [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 Splice Isoform 2 of Vam6/Vps39-like protein [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • vacuolar protein sorting 39 isoform 2 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • vacuolar protein sorting 39 (yeast) [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Vacuolar protein sorting 39 (yeast) [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • mVAM6 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • VPS39 short isoform [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 SPLICE ISOFORM 2 OF VAM6/VPS39-LIKE PROTEIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Vps39 Isoform 2 of Vam6/Vps39-like protein [mouse-ipi-250309-contam.fasta]
  • vam6/Vps39-like protein isoform 2 [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00227698.1|SWISS-PROT:Q8R5L3-2|TREMBL:Q3TC98;Q5KU38;Q8BUJ2;Q8C051|ENSEMBL:ENSMUSP00000028752|REFSEQ:NP_849182|VEGA:OTTMUSP00000016273 Tax_Id=10090 Gene_Symbol=Vps39 Isoform 2 of Vam6/Vps39-like protein [ipi.MOUSE.fasta.20090209]
  • Isoform 2 of Vam6/Vps39-like protein OS=Mus musculus GN=Vps39 [011711_HMR.fasta]
  • tr|Q5KU38|Q5KU38_MOUSE MVAM6 OS=Mus musculus GN=Vps39 PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • MVAM6 OS=Mus musculus GN=Vps39 PE=2 SV=1 [mouse-uniprot-290313-contam.fasta]
  • Isoform of Q8R5L3, Isoform 2 of Vam6/Vps39-like protein OS=Mus musculus GN=Vps39 [MOUSE.fasta.20160308]
    • Organism: Mus musculus
    Length: 875 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHDAFEPVPI LEKLPLQIDC LAAWEEWLLV GTKQGHLLLY RIRKDVGCNR FEVTLEKSNK  60
   61 NFSKKIQQIH VVSQFKILVS LLENNIYVHD LLTFQQITTV SKAKGASLFT CDLQHTETGE 120
  121 EVLRMCVAVR KKLQLYFWKD REFHELQGDF SVPDVPKSMA WCENSICVGF KRDYYLIRVD 180
  181 GKGSIKELFP TGKQLEPLVA PLADGKVAVG QDDLTVVLNE EGICTQKCAL NWTDIPVAME 240
  241 HQPPYIVAVL PRYVEIRTLE PRLLVQSIEL QRPRFITSGG SNIIYVASNH FVWRLIPVPM 300
  301 ATQIQQLLQD KQFELALQLA EMKDDSDSEK QQQIHHIKNL YAFNLFCQKR FDESMQVFAK 360
  361 LGTDPTHVMG LYPDLLPTDY RKQLQYPNPL PTLSGAELEK AHLALIDYLT QKRSQLVKKL 420
  421 NDSDHQSSTS PLMEGTPTIK SKKKLLQIID TTLLKCYLHT NVALVAPLLR LENNHCHIEE 480
  481 SEHVLKKAHK YSELIILYEK KGLHEKALQV LVDQSKKANS PLKGHERTVQ YLQHLGTENL 540
  541 HLIFSYSVWV LRDFPEDGLK IFTEDLPEVE SLPRDRVLNF LIENFKALAI PYLEHIIHVW 600
  601 EETGSQFHNC LIQLYCEKVQ SLMKDYLLSL PTGKSPVPAG EEGGELGEYR QKLLMFLEIS 660
  661 SHYDPGRLIC DFPFDGLLEE RALLLGRMGK HEQALFIYVH VLKDTKMAKE YCHKHYDQNK 720
  721 EGNKDVYLSL LRMYLSPPSI HCLGPIKLEL LEPQANLQAA LQVLELHYSK LDTTKAINLL 780
  781 PANTQINDIR IFLEKVLEEN AQKKRFNQVL KNLLHAEFLR VQEERILHQQ VKCIITEEKV 840
  841 CMVCKKKIGN SAFARYPNGV VVHYFCSKEV NSADT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle