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Protein Overview: DCPS_SCHPO

General Information:
Name(s) found: DCPS_SCHPO [Swiss-Prot]
Description(s) found:
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  • gi|19112986|ref|NP_596194.1| hypothetical protein SPBP4H10.20 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • m7GpppX diphosphatase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nhm1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 304 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEESSAAKIQ LLKEFKFEKI LKDDTKSKII TLYGKIRNEV ALLLLEKTAF DLNTIKLDQL  60
   61 ATFLQDTKLV ENNDVFHWFL STNFQDCSTL PSVKSTLIWP ASETHVRKYS SQKKRMVCET 120
  121 PEMYLKVTKP FIETQRGPQI QWVENILTHK AEAERIVVED PDPLNGFIVI PDLKWDRQTM 180
  181 SALNLMAIVH ATDIASIRDL KYKHIPLLEN IRNKVLTEVP KQFSVDKNQL KMFVHYLPSY 240
  241 YHLHVHILHV DHETGDGSAV GRAILLDDVI DRLRNSPDGL ENVNITFNIG EQHFLFQPLT 300
  301 NMNA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..304] PSI-BLAST 101.0 Structure of human Dcps

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • m7G(5')pppN diphosphatase activity
    		•  11.4290795741181 bayes_pls_golite062009
  • RNA binding
    		•  2.65561768780165 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.24536295645879 bayes_pls_golite062009
  • binding
    		•  1.12315862086587 bayes_pls_golite062009
  • hydrolase activity
    		•  0.927269748430359 bayes_pls_golite062009
  • catalytic activity
    		•  0.096119422680995 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle