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Protein Overview: RAD54_SCHPO

General Information:
Name(s) found: RAD54_SCHPO [Swiss-Prot]
Description(s) found:
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  • gi|19115202|ref|NP_594290.1| hypothetical protein SPAC15A10.03c [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • DNA repair protein rhp54 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rhp54 PE=1 SV=2 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 852 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQQPTTAKP RISTSSKLNT VLSKNKENVP GKLFKKFKCP SLVISEKRKE LPLRKKPRVN  60
   61 YSEYGSVDGK YDSAYVSENV SGLATIKEAN RLILNHERRD PSTVIKKQFS VPKPIKGHED 120
  121 ISKLCAHRPP PTLGMKRKVD FIPRPLYDPA DEFAIVLYDP TTDADEIIPD IKEVLAEKRK 180
  181 KDELLKNRKG KKEISDSEPE SDHDSCVSTD TVASCSTEQS LITSNTSKHR RPNKSLKDLL 240
  241 GIQKEKPPPP PVAVVIDPKL ARILRPHQIE GVKFLYKCVT GRIDRCANGC IMADEMGLGK 300
  301 TLQCIALLWT LLKQSPQAGK PTIEKAIITC PSSLVKNWAN ELVKWLGKDA ITPFILDGKS 360
  361 SKQELIMALQ QWASVHGRQV TRPVLIASYE TLRSYVEHLN NAEIGMLLCD EGHRLKNSDS 420
  421 LTFTALDKLN VQRRVILSGT PIQNDLSEYF SLLNFANPGL LGSRQEFRKN YEIPILKGRD 480
  481 ADGTEKDKEN GDAKLAELAK IVNRFIIRRT NDILSKYLPV KYEHVVFCNL SEFQLSLYKH 540
  541 FITSPEINKI LRGTGSQPLK AIGLLKKICN HPDLLNLTED LEGCEALFPP GFIPRELRGR 600
  601 DRNIDSSLSG KMLVLERMLY QIKQETDDKI VLISNYTSTL DLFEQLCRAR GYKALRLDGT 660
  661 MNVNKRQRLV DTFNDPEKDA FVFLLSSKAG GCGINLIGAN RLILFDPDWN PAADQQALAR 720
  721 VWRDGQKKDC FVYRFIATGT IEEKIFQRQS HKQSLSSCVV DEAQDVERHF SLDNLRQLFQ 780
  781 LNDHTVCETH ETYKCKRCRD GKQFIRAPAM LYGDTSTWNH FTNPTLDRIE DHLLKREAGK 840
  841 QQVSTVFQYK SH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..201] Pfam 14.21467 No description for PF08658.1 was found. No confident structure predictions are available.
    2 View Details [202..852] PSI-BLAST 97.39794 Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle