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Protein Overview: SPT4A_MOUSE

General Information:
Name(s) found: SPT4A_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|6678181|ref|NP_033322.1| suppressor of Ty 4 homolog 1 [Mus musculus] [NCBI NR]
  • gi|56972238|gb|AAH87923.1| Suppressor of Ty 4 homolog 1 (S. cerevisiae) [Mus musculus] [NCBI NR]
  • gi|56800284|emb|CAI35953.1| suppressor of Ty 4 homolog (S. cerevisiae) [Mus musculus] [NCBI NR]
  • gi|54039623|sp|P63271.1|SPT41_MOUSE RecName: Full=Transcription elongation factor SPT4 1; AltName: Full=DRB sensitivity-inducing factor small subunit 1; Short=DSIF small subunit 1 [NCBI NR]
  • gi|38511709|gb|AAH61174.1| Suppressor of Ty 4 homolog 1 (S. cerevisiae) [Mus musculus] [NCBI NR]
  • gi|3779194|gb|AAC71659.1| chromatin structural protein homolog [Mus musculus] [NCBI NR]
  • gi|19353442|gb|AAH24391.1| Suppressor of Ty 4 homolog 1 (S. cerevisiae) [Mus musculus] [NCBI NR]
  • gi|187957092|gb|AAI41093.1| Suppressor of Ty 4 homolog 1 (S. cerevisiae) [Mus musculus] [NCBI NR]
  • gi|187466197|emb|CAQ52074.1| suppressor of Ty 4 homolog (S. cerevisiae) [Mus musculus] [NCBI NR]
  • gi|148683883|gb|EDL15830.1| mCG7669, isoform CRA_c [Mus musculus] [NCBI NR]
  • gi|1401066|gb|AAB18730.1| Supt4h [NCBI NR]
  • Transcription elongation factor SPT4-A OS=Mus musculus GN=Supt4h1a PE=2 SV=1 [Swiss-Prot]
  • Transcription elongation factor SPT4 1 OS=Mus musculus GN=Supt4h1 PE=2 SV=1 [Swiss-Prot]
  • (P63271) Transcription initiation protein SPT4 homolog 1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):11-88514328 Transcription initiation protein SPT4 homolog 1 [hmr_yeast5_DM3-1_pombe.fasta]
  • suppressor of Ty 4 homolog [HMR_022704-rand.fasta]
  • Transcription initiation protein SPT4 homolog 1 [ipi.MOUSE.v3.06.fasta]
  • Suppressor of Ty 4 homolog [Mus musculus]gi|6678181|ref|NP_033322.1| suppressor of Ty 4 homolog [Mus musculus]gi|4507311|ref|NP_003159.1| suppressor of Ty 4 homolog 1 [Homo sapiens]gi|38511709|gb|AAH61174.1| Suppressor of Ty 4 homolog [Mus musculus]gi [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 Splice Isoform 1 of Transcription elongation factor SPT4 1 [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_009296) suppressor of Ty 4 homolog (S. cerevisiae) [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • suppressor of Ty 4 homolog 1 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Tax_Id=10090 Transcription initiation protein SPT4 homolog 1 [EBI-IPI_mouse_3.06_05-10-2005_origrev_con.fasta]
  • Transcription elongation factor SPT4 1 (DRB sensitivity-inducing factor small subunit 1) (DSIF small subunit 1) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Suppressor of Ty 4 homolog 1 (S. cerevisiae) [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • suppressor of Ty 4 homolog (S. cerevisiae) [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • mCG7669, isoform CRA_c [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • chromatin structural protein homolog [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Supt4h [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 TRANSCRIPTION INITIATION PROTEIN SPT4 HOMOLOG 1 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Supt4h1 Transcription elongation factor SPT4 1 [mouse-ipi-250309-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Supt4h1 Isoform 1 of Transcription elongation factor SPT4 1 [ipi.MOUSE_jw_12may08.contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Supt4h1 Isoform 1 of Transcription elongation factor SPT4 1 ENSMUSG00000020485 IPI00124000 IPI00551114 IPI00551176 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • transcription elongation factor SPT4 1 [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00124000.1|SWISS-PROT:P63271|ENSEMBL:ENSMUSP00000091487|REFSEQ:NP_033322|VEGA:OTTMUSP00000001305;OTTMUSP00000042498 Tax_Id=10090 Gene_Symbol=Supt4h1 Transcription elongation factor SPT4 1 [ipi.MOUSE.fasta.20090209]
  • Transcription elongation factor SPT4 1 OS=Mus musculus GN=Supt4h1 [011711_HMR.fasta]
  • sp|P63271|SPT41_MOUSE Transcription elongation factor SPT4 1 OS=Mus musculus GN=Supt4h1 PE=2 SV=1 [uniprot.sptr.mouse.20130102]
    • Organism: Mus musculus
    Length: 117 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALETVPKDL RHLRACLLCS LVKTIDQFEY DGCDNCDAYL QMKGNREMVY DCTSSSFDGI  60
   61 IAMMSPEDSW VSKWQRVSNF KPGVYAVSVT GRLPQGIVRE LKSRGVAYKS RDTAIKT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] PSI-BLAST 40.0 No description for 2exuA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle