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Protein Overview: gi|110616770, gi...

General Information:
Name(s) found: gi|110807222 [NCBI NR]
gi|110616770 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|110807222|ref|YP_690742.1| shikimate kinase I [Shigella flexneri 5 str. 8401] [NCBI NR]
  • gi|110616770|gb|ABF05437.1| Shikimate kinase [Shigella flexneri 5 str. 8401] [NCBI NR]
    • Organism: Shigella flexneri 5 str. 8401
    Length: 240 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVARQRACSD QICRGMGDLF SCQTRWSIEI IFSLTLAISY EVSVHVLRRS LSEAGLSLTN  60
   61 SLSSTEKMAE KRNIFLVGPM GAGKSTIGRQ LAQQLNMEFY DSDQEIEKRT GADVGWVFDL 120
  121 EGEEGFRDRE EKVINELTEK QGIVLATGGG SVKSRETRNR LSARGVVVYL ETTIEKQLAR 180
  181 TQRDKKRPLL HVETPPREVL EALANERNPL YEEIADVTIR TDDQSAKVVA NQIIHMLESN 240
  241

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..240] PSI-BLAST 37.69897 Shikimate kinase (AroK)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.37148167194523 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle