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Protein Overview: gi|107100228

General Information:
Name(s) found: gi|107100228 [NCBI NR]
Description(s) found:
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  • gi|107100228|ref|ZP_01364146.1| hypothetical protein PaerPA_01001251 [Pseudomonas aeruginosa PACS2] [NCBI NR]
  • hypothetical protein PaerPA_01001251 [Pseudomonas aeruginosa PACS2] [nr-271106-contam.fasta]
    • Organism: Pseudomonas aeruginosa PACS2
    Length: 599 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDLSHIRNF SIIAHIDHGK STLADRFIQM CGGLSDREME AQVLDSMDLE RERGITIKAH  60
   61 SVTLHYKAQD GKTYQLNFID TPGHVDFTYE VSRSLAACEG ALLVVDAGQG VEAQSVANCY 120
  121 TAIEQGLEVM PVLNKMDLPQ AEPERVKEEI ESIIGIDATD AVACSAKSGM GVLEVLERLV 180
  181 TAIPAPEGEI EAPLQALIID SWFDNYLGVV SLVRVKNGRV KKGDKILVKS TGKVHQVDSV 240
  241 GVFTPKHTET VDLKAGEVGF IIAGIKDIHG APVGDTLTLN NTPDVEVLPG FKRVKPQVYA 300
  301 GLFPVSSDDF EDFRDALQKL TLNDSSLQYE PESSEALGFG FRCGFLGMLH MEIIQERLER 360
  361 EYDLDLITTA PTVVFEIVQK NGEIIYVDNP SKLPDLASIQ EMREPICRAT ILVPKDHLGN 420
  421 VITLCIEKRG VQRDMHFLSG QVQVVYDLPM NEVVLDFFDR LKSTSRGYAS LDYSFDRFEP 480
  481 SNLVRLDVLI NGEKVDALAL IVHRDNAPYK GRQLVEKMKE LIPRQMFDVA IQAAIGGQII 540
  541 ARSTVKALRK NVLAKCYGGD VSRKRKLLEK QKAGKKRMKQ VGSVEIPQEA FLAVLKVDS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..520] PSI-BLAST 89.69897 Elongation factor G (EF-G), domain II; Elongation factor G (EF-G), N-terminal (G) domain; Elongation factor G (EF-G), domain IV; Elongation factor G (EF-G)
    2 View Details [521..599] Pfam 46.638272 No description for PF06421.3 was found. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle