YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|13364673, gi|...

General Information:
Name(s) found: gi|15834450 [NCBI NR]
gi|13364673 [NCBI NR]
Description(s) found:
Found 3 descriptions.
SHOW ALL
  • gi|15834450|ref|NP_313223.1| putative transport protein [Escherichia coli O157:H7 str. Sakai] [NCBI NR]
  • gi|13364673|dbj|BAB38619.1| putative transport protein [Escherichia coli O157:H7 str. Sakai] [NCBI NR]
    • Organism: Escherichia coli O157:H7 str. Sakai
    Length: 447 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNSILVILC LIAVSAFFSM SEISLAASRK IKLKLLADEG NINAQRVLNM QENPGMFFTV  60
   61 VQIGLNAVAI LGGIVGDAAF SPAFHSLFSR YMSAELSEQL SFILSFSLVT GMFILFADLT 120
  121 PKRIGMIAPE AVALRIINPM RFCLYVCTPL VWFFNGLANI IFRIFKLPMV RKDDITSDDI 180
  181 YAVVEAGALA GVLRKQEHEL IENVFELESR TVPSSMTPRE NVIWFDLHED EQSLKNKVAE 240
  241 HPHSKFLVCN EDIDHIIGYV DSKDLLNRVL ANQSLALNSG VQIRNTLIVP DTLTLSEALE 300
  301 SFKTAGEDFA VIMNEYALVV GIITLNDVMT TLMGDLVGQG LEEQIVARDE NSWLIDGGTP 360
  361 IDDVMRVLDI DEFPQSGNYE TIGGFMMFML RKIPKRTDSV KFAGYKFEVV DIDNYRIDQL 420
  421 LVTRIDSKAT ALSPKLPDAK DKEESVA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..350] PSI-BLAST 9.69897 No description for 2ooxG was found.
    2 View Details [351..447] PSI-BLAST 17.045757 No description for 2p4pA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • magnesium ion transmembrane transporter activity
    		•  4.09048700098247 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  3.20360029620216 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.84728629370153 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.83549234777732 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.62479915553705 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  2.22305253722734 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.09656284183303 bayes_pls_golite062009
  • transporter activity
    		•  1.41639006729672 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  1.21441469552217 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.13866512878605 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.917464827903503 bayes_pls_golite062009
  • binding
    		•  0.57037105268889 bayes_pls_golite062009
  • catalytic activity
    		•  0.074501016141151 bayes_pls_golite062009
  • protein binding
    		•  0.0511755694922399 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle