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Protein Overview: gi|89104412

General Information:
Name(s) found: gi|89104412 [NCBI NR]
Description(s) found:
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  • gi|89104412|ref|ZP_01176956.1| COG2199: FOG: GGDEF domain [Yersinia pestis biovar Orientalis str. IP275] [NCBI NR]
  • COG2199: FOG: GGDEF domain [Yersinia pestis biovar Orientalis str. IP275] [nr-271106-contam.fasta]
    • Organism: Yersinia pestis biovar Orientalis str. IP275
    Length: 425 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPKKNHNSA EKLPTLAGVL RRIHLSVAIV SVVTACIFLT VAALFALRVY VDHNLHLIAR  60
   61 AISYTTEAAV VFGDNVEANE LLALIASNEE VAEAKIIDKH NRQIAYWALP DDGPIHHMEQ 120
  121 IVARWILPAP VVLPMFHAGD EIGKIVIVGH GGSLLRFLLQ GLAGMLACLT VSTLVALFLS 180
  181 RRMLLGIVGS LKRITEVAHN VSRHRSFGQR VPSAKVAELN ELSNDFNGLL EELEVWQKHL 240
  241 TQENDSLAYR AAHDSLTGLA NRTFFEGRLS RTLNDCQPGE HTAVLFLDGD HFKDVNDNYG 300
  301 HAAGDLVLTT IAVRIRALLR ETDLVARLGG DEFAVLLTPI HNLDDVLTIA DHIIDSMALP 360
  361 IILAEGCEIT VSLSIGIAVY PDHAQTPEKL LQRADEAMYQ AKKNFRSGKR IFAYQPNTTN 420
  421 TESLG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..425] PSI-BLAST 36.045757 Response regulator PleD in complex with c-diGMP


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle