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Protein Overview: gi|229900519, gi...

General Information:
Name(s) found: gi|229900519 [NCBI NR]
gi|229682538 [NCBI NR]
gi|108810344 [NCBI NR]
gi|108773992 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|229900519|ref|ZP_04515648.1| uridine phosphorylase [Yersinia pestis Nepal516] [NCBI NR]
  • gi|229682538|gb|EEO78625.1| uridine phosphorylase [Yersinia pestis Nepal516] [NCBI NR]
  • gi|108810344|ref|YP_646111.1| uridine phosphorylase [Yersinia pestis Nepal516] [NCBI NR]
  • gi|108773992|gb|ABG16511.1| uridine phosphorylase [Yersinia pestis Nepal516] [NCBI NR]
    • Organism: Yersinia pestis Nepal516
    Length: 253 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSDVFHLG LTKNDLQGAT LAIVPGDPQR VEKIAKLMDN PVHLASHREF TSWRAELDGK  60
   61 AVIVCSTGIG GPSTSIAVEE LAQLGVRTFL RIGTTGAIQP HINVGDVLVT TAAVRLDGAS 120
  121 LHFAPMEFPA VADFSCTTAL VNAAKSVGAT THIGITASSD TFYPGQERYD TFSGRVVRHF 180
  181 KGSMEEWQSM GVMNYEMESA TLLTMCASQG LRAGMVAGVI VNRTQQEIPN EETMKATESH 240
  241 AVKIVVEAAR HLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..253] PSI-BLAST 58.39794 Uridine phosphorylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • purine-nucleoside phosphorylase activity
    		•  3.68206997938506 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  3.66765825367784 bayes_pls_golite062009
  • catalytic activity
    		•  2.18268586151113 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  2.01261001022129 bayes_pls_golite062009
  • S-methyl-5-thioadenosine phosphorylase activity
    		•  1.6959166270803 bayes_pls_golite062009
  • transferase activity
    		•  1.42022417161912 bayes_pls_golite062009
  • nucleobase binding
    		•  1.33291775180025 bayes_pls_golite062009
  • nucleoside binding
    		•  1.11256863177576 bayes_pls_golite062009
  • purine binding
    		•  1.00226077276304 bayes_pls_golite062009
  • binding
    		•  0.192121943858605 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle