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Protein Overview: gi|108778263, gi...

General Information:
Name(s) found: gi|108806350 [NCBI NR]
gi|108778263 [NCBI NR]
Description(s) found:
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  • gi|108806350|ref|YP_650266.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis Antiqua] [NCBI NR]
  • gi|108778263|gb|ABG12321.1| D-3-phosphoglycerate dehydrogenase [Yersinia pestis Antiqua] [NCBI NR]
  • D-3-phosphoglycerate dehydrogenase [Yersinia pestis Antiqua] [nr-271106-contam.fasta]
    • Organism: Yersinia pestis Antiqua
    Length: 413 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKVSLEKDR IKFLLVEGVH QSAVDNLRAA GYSNIEYHKG ALDAESLKAS IRDAHFIGIR  60
   61 SRTHLSEDVF AAAEKLVAVG CFCIGTNQVD LKAATKRGVP VFNAPFSNTR SVAEMVLGEL 120
  121 LLMFRGIPSA NAKAHRGEWN KLAVGSFEAR GKKLGIIGYG HIGTQLGILA ESIGMKVFFY 180
  181 DIENKLSLGN AQQVRQLSDL LNMSDVVSLH VPENHTTKNM IGAEQLAQMK PGALLINASR 240
  241 GTVVDIPALC DALSSNHLSG AAIDVFPEEP ATNKDPFNSP LCEFDNVLLT PHIGGSTQEA 300
  301 QENIGDEVAG KLAKYSDNGS TLSAVNFPEV SLPAHGDNTR RLLHIHENRP GILTSINTIF 360
  361 AEQNVNIAAQ YLQTSADIGY VVIDVETDDA DNAEKALQAM KAIPGTIRAR LLY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..413] PSI-BLAST 107.0 The active form of phosphoglycerate dehydrogenase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • acetolactate synthase activity
    		•  3.48670706716817 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  2.1980358206838 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.69771604880532 bayes_pls_golite062009
  • alcohol dehydrogenase (NAD) activity
    		•  1.68027744358887 bayes_pls_golite062009
  • alcohol dehydrogenase activity, zinc-dependent
    		•  0.839863523675468 bayes_pls_golite062009
  • phosphoglycerate dehydrogenase activity
    		•  0.639509916626856 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.418775403210681 bayes_pls_golite062009
  • binding
    		•  0.355184540089764 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.32207755075663 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle