YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Y2048_YERPN

General Information:
Name(s) found: Y2048_YERPN [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|229902540|ref|ZP_04517657.1| conserved protein [Yersinia pestis Nepal516] [NCBI NR]
  • gi|229679987|gb|EEO76086.1| conserved protein [Yersinia pestis Nepal516] [NCBI NR]
  • gi|123373162|sp|Q1CI03.1|Y2048_YERPN RecName: Full=UPF0176 protein YPN_2048 [NCBI NR]
  • gi|108812210|ref|YP_647977.1| hypothetical protein YPN_2048 [Yersinia pestis Nepal516] [NCBI NR]
  • gi|108775858|gb|ABG18377.1| hypothetical protein YPN_2048 [Yersinia pestis Nepal516] [NCBI NR]
  • UPF0176 protein YPN_2048 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=YPN_2048 PE=3 SV=1 [Swiss-Prot]
  • hypothetical protein YPN_2048 [Yersinia pestis Nepal516] [nr-271106-contam.fasta]
    • Organism: Yersinia pestis Nepal516
    Length: 355 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVLHNRISN EELKARMLAE TEPRTTVSFY KYFTLEDAKT FRDNLYSQFV KLGVFGRVYV  60
   61 AKEGINAQIS VPANRYDEFK IALFASHPAL DQVRLNVAHE DDGKSFWVLR LKVRERIVAD 120
  121 GIDDDSFDPA NIGHYLKADQ VNQMIDDPDT LFVDMRNHYE YEVGHFENAI EVPSDTFREQ 180
  181 LPMAVDMLQH DKEKNIVMYC TGGIRCEKAS AYMLHNGFKN VYHVEGGIIE YARKAKEQGL 240
  241 PLKFIGKNFV FDERMGERIS DDVIAHCHQC GTPCDAHTNC KNDGCHLLFI QCPVCAAKFE 300
  301 GCCSQICQEE LKLPQEEQRS RRAGRENGIK IFNKSKGLLQ ATMHIPSPEK SADEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..251] PSI-BLAST 30.221849 Rhodanese
    2 View Details [252..355] MSA 1.157994 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.100790573401642 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle