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Protein Overview: RL13A_MOUSE

General Information:
Name(s) found: RL13A_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|74226857|dbj|BAE27073.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74223160|dbj|BAE40717.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74220084|dbj|BAE40618.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|74217617|dbj|BAE33555.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|71059667|emb|CAJ18377.1| Rpl13a [Mus musculus] [NCBI NR]
  • gi|56541254|gb|AAH86896.1| Ribosomal protein L13A [Mus musculus] [NCBI NR]
  • gi|52078403|gb|AAH82289.1| Ribosomal protein L13A [Mus musculus] [NCBI NR]
  • gi|31981945|ref|NP_033464.2| ribosomal protein L13A [Mus musculus] [NCBI NR]
  • gi|148690859|gb|EDL22806.1| mCG23455, isoform CRA_e [Mus musculus] [NCBI NR]
  • gi|136478|sp|P19253.4|RL13A_MOUSE RecName: Full=60S ribosomal protein L13a; AltName: Full=Transplantation antigen P198; AltName: Full=Tum-P198 antigen [NCBI NR]
  • gi|12841255|dbj|BAB25132.1| unnamed protein product [Mus musculus] [NCBI NR]
  • 60S ribosomal protein L13a OS=Mus musculus GN=Rpl13a PE=1 SV=4 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):7-33755034 ribosomal protein L13a [hmr_yeast5_DM3-1_pombe.fasta]
  • ribosomal protein L13a; tissue specific transplantation antigen P198-7; tum-transplantation antigen P198 [HMR_022704-rand.fasta]
  • ribosomal protein L13a [Mus musculus]gi|52078403|gb|AAH82289.1| Ribosomal protein L13a [Mus musculus]gi|136478|sp|P19253|R13A_MOUSE 60S ribosomal protein L13a (Transplantation antigen P198) (Tum-P198 antigen)gi|12841255|dbj|BAB25132.1| unnamed protein [nrdb_11152004_Chlamydomonas]
  • ribosomal protein L13a [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • 60S ribosomal protein L13a (Transplantation antigen P198) (Tum-P198 antigen) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • mCG23455, isoform CRA_e [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Ribosomal protein L13a [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Rpl13a [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 RIBOSOMAL PROTEIN L13A [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • ribosomal protein L13A [Mus musculus] [NCBI-RefSeq_mouse_na_04-07-2009_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Rpl13a 60S ribosomal protein L13a [mouse-ipi-250309-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Rpl13a 60S ribosomal protein L13a ENSMUSG00000003426 IPI00223217 IPI00654400 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • 60S ribosomal protein L13a [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00223217.6|SWISS-PROT:P19253|TREMBL:Q5M9M0|ENSEMBL:ENSMUSP00000099730|REFSEQ:NP_033464|VEGA:OTTMUSP00000017768 Tax_Id=10090 Gene_Symbol=Rpl13a 60S ribosomal protein L13a [ipi.MOUSE.fasta.20090209]
  • 60S ribosomal protein L13a OS=Mus musculus GN=Rpl13a [011711_HMR.fasta]
  • Tax_Id=10090 Gene_Symbol=Rpl13a;Flt3l 60S ribosomal protein L13a [EBI-IPI_mouse_3.71_03-24-2010_reversed.fasta]
  • sp|P19253|RL13A_MOUSE 60S ribosomal protein L13a OS=Mus musculus GN=Rpl13a PE=1 SV=4 [uniprot.sptr.mouse.20130102]
  • tr|Q5M9M0|Q5M9M0_MOUSE MCG23455, isoform CRA_e OS=Mus musculus GN=Rpl13a PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • MCG23455, isoform CRA_e OS=Mus musculus GN=Rpl13a PE=2 SV=1 [mouse-uniprot-290313-contam.fasta]
  • Isoform of P19253, 60S ribosomal protein L13a OS=Mus musculus GN=Rpl13a PE=1 SV=1 [MOUSE.fasta.20160308]
    • Organism: Mus musculus
    Length: 203 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEGQVLVLD GRGHLLGRLA AIVAKQVLLG RKVVVVRCEG INISGNFYRN KLKYLAFLRK  60
   61 RMNTNPSRGP YHFRAPSRIF WRTVRGMLPH KTKRGQAALE RLKVLDGIPP PYDKKKRMVV 120
  121 PAALKVVRLK PTRKFAYLGR LAHEVGWKYQ AVTATLEEKR KEKAKMHYRK KKQILRLRKQ 180
  181 AEKNVEKKIC KFTEVLKTNG LLV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..203] PSI-BLAST 46.522879 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle