YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|109626138, gi...

General Information:
Name(s) found: gi|110668391 [NCBI NR]
gi|109626138 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|110668391|ref|YP_658202.1| ABC-type dipeptide/oligopeptide/nickel transport systems, ATP-binding protein I & II [Haloquadratum walsbyi DSM 16790] [NCBI NR]
  • gi|109626138|emb|CAJ52592.1| ABC-type dipeptide/oligopeptide/nickel transport systems, ATP-binding protein I & II [Haloquadratum walsbyi DSM 16790] [NCBI NR]
  • ABC-type dipeptide/oligopeptide/nickel transport systems, ATP-binding protein I & II [Haloquadratum walsbyi DSM 16790] [nr-271106-contam.fasta]
    • Organism: Haloquadratum walsbyi DSM 16790
    Length: 860 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPILSLSEL RTQFSTERGQ VKAVDDVSLD VHAGETVGLV GESGSGKSVT ALSAMGLIDD  60
   61 PGQVIGGEVT IQSASLAEMF RDQYTDLSFV DGDQILLTEA PEEALRSVRG AEMSMIFQDP 120
  121 MTSLNPALTI GEQVAESLKL HQFGNRKKDT WINAIREMLT RIRSNPDNAV VERTIDVLSQ 180
  181 VGISEPASRI DEYPHEFSGG MRQRVLIAIA LACQPNILIA DEPTTALDVT IQAQILELIN 240
  241 ELQADLGMGV LFITHDLGVV AETCDRVAVM YAGKIVEEGP VEEIFTNPSH PYTYALLESI 300
  301 PTANRDRLTP IDGNVPDLID MPEGCNFAPR CPWAEPACRH GDIASRQHGP ADVDHRAKCI 360
  361 LDEFNEDEYG TDADLTAETT MQTSDPILEV DGLQKHFLQS ESPLDEYLEL DTERVKAVDG 420
  421 VDLTVYKGET VGLVGESGCG KSTTGQSILQ LIEPTDGRVV FAGDDLTDLS KSELRKRRCD 480
  481 LQMIFQDPMS SLDPRMRVEQ IIAEPLQIHD LPADTNSSNQ TTRKQRVTEL LNAVGLDPDQ 540
  541 RDRYPHELSG GQRQRVGIAR AIAVDPEFII CDEPVSALDV SVQAQILNLL KDLQSEFGLT 600
  601 FLFIAHDLSV VRHICDRIAV MYLGEIVEIA PTETLFTTPQ HPYTRALLSA IPVPDPTAHT 660
  661 DRVILDGDVP SPIDPPSGCH FRTRCPEVIP PDDVEIDQST YRDIMTLRER VSNAAIDVDA 720
  721 IQEETGVTDE DALIDTLSKR YINNPLSGEN RRVVNTALKA VVNGDFETAT TRLHERFASV 780
  781 CEQQSPAFET SKESVSSSSG ISTAEEAHPT ACHRYDDDMN AEPLEVIDTD IDTDTDTDAN 840
  841 ANTNTDTNTT YADVRRSNTD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..299] PSI-BLAST 24.39794 No description for 2r6fA was found.
    2 View Details [300..361] Pfam 19.0 No description for PF08352.4 was found. No confident structure predictions are available.
    3 View Details [362..695] PSI-BLAST 75.0 No description for 2it1A was found.
    4 View Details [696..860] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle