YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|116007158, gi...

General Information:
Name(s) found: gi|116007158 [NCBI NR]
gi|113193605 [NCBI NR]
Description(s) found:
Found 6 descriptions.
SHOW ALL
  • gi|116007158|ref|NP_001036274.1| radish, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|113193605|gb|ABI30979.1| radish, isoform B [Drosophila melanogaster] [NCBI NR]
    • Organism: Drosophila melanogaster
    Length: 653 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAICFVCNL PIMSHQVGLV WQGGNGWDDL VREQLEESTI RQRLGGRRDS AAQITTPPST  60
   61 SPPPGLQRRR RSSLAQLTDI LREWSGGTKQ QQQHHSQQQQ QQLQQASRSK AQLNRRETLA 120
  121 DLARSLPWRT STTTDASTGA GGSGGGGCTT YMAPRKRRES SADSGIRSMR SRRDSNTAEF 180
  181 VRHWNRRESG AVEEQPSVSV PVVVECSKSA SRRGSGESYL SSSRRDSNVA GRVTTPPPPG 240
  241 KYQMTKKRDS LAAPEFPNFR QEQRPSTSSA GSCSDHSMPL ISTHSSTHHL AHQQVDSACQ 300
  301 ALPPPTIITS SVTPPATSPT APKGRRDSQT QCGRVNRRDS KAGVSPERAP RLQRLQRQAT 360
  361 AFDEGCLPGG SRRGSQPALS PDPPDDCERR TSRRDSLSPD SASRGGRRDS RTHLSPDRSH 420
  421 ERDGSPRRHT LRRQSSSAAR SPRSPDSNSC CSSRDPSPCS RPQTQTTVEQ NQRPAIRRQS 480
  481 TTEEILIARG FRRQSTTEEM IRCRNFRRQS SQSDDVCRYR GRRDSSAQII DGTIGTMTVE 540
  541 TTSTFFDSST QTEPSPLYDN NHYHEECLRC NSCGLNLTGP NQKRARRFKN QILCDLHFAD 600
  601 VALMECSDFM QQLRSFKPQS LGCAVARRKS STTLIFPLPP QACSDLQINR NQF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..267] deduced N/A No confident structure predictions are available.
    2 View Details [268..345] MSA 2.150991 View MSA. No confident structure predictions are available.
    3 View Details [346..525] MSA 1.146983 View MSA. No confident structure predictions are available.
    4 View Details [526..653] FFAS03 1.12 LIM only 4 (Lmo4)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.175200369479833 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle