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Protein Overview: gi|29791869, gi|...

General Information:
Name(s) found: gi|34452693 [NCBI NR]
gi|29791869 [NCBI NR]
Description(s) found:
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  • gi|34452693|ref|NP_898880.1| vacuolar protein sorting 28 isoform 2 [Homo sapiens] [NCBI NR]
  • gi|29791869|gb|AAH50713.1| Vacuolar protein sorting 28 homolog (S. cerevisiae) [Homo sapiens] [NCBI NR]
  • VPS28 protein [hmr_yeast5_DM3-1_pombe.fasta]
  • vacuolar protein sorting 28 isoform 2; yeast class E protein Vps28p homolog [HMR_022704.fasta]
  • vacuolar protein sorting 28 isoform 2 [Homo sapiens]gi|29791869|gb|AAH50713.1| Vacuolar protein sorting 28, isoform 2 [Homo sapiens] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=9606 vacuolar protein sorting 28 isoform 2 [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • vacuolar protein sorting 28 isoform 2 [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • Tax_Id=9606 Vacuolar protein sorting 28, isoform 2 [EBI-IPI_human_3.12_11-03-2005_con_reversed.fasta]
  • vacuolar protein sorting 28 isoform 2; yeast class E protein Vps28p homolog [Homo sapiens] [HumanGallus06162005.fasta]
  • Vacuolar protein sorting 28 homolog (S. cerevisiae) [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 VACUOLAR PROTEIN SORTING 28, ISOFORM 2 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=VPS28 vacuolar protein sorting 28 isoform 2 [human-ipi-250309-contam.fasta]
  • IPI:IPI00328913.2|TREMBL:Q86VK0|ENSEMBL:ENSP00000366565|REFSEQ:NP_898880|VEGA:OTTHUMP00000178474 Tax_Id=9606 Gene_Symbol=VPS28 vacuolar protein sorting 28 isoform 2 [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=VPS28 vacuolar protein sorting 28 isoform 2 ENSG00000160948 IPI00007155 IPI00328913 IPI00793978 IPI00795056 IPI00434742 IPI00798357 IPI00796001 IPI00794724 [drosphohumanreversed.fasta]
  • vacuolar protein sorting-associated protein 28 homolog isoform 2 [Homo sapiens] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • Vacuolar protein sorting 28 homolog (S. cerevisiae) OS=Homo sapiens GN=VPS28 [011711_HMR.fasta]
  • Vacuolar protein sorting 28 homolog (S. cerevisiae) OS=Homo sapiens GN=VPS28 PE=2 SV=1 [UniProt_Human_05-17-2011_reversed.fasta]
  • GeneSymbol=VPS28 Synonyms=MGC60323 vacuolar protein sorting-associated protein 28 homolog isoform 2 [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • Isoform 2 of Vacuolar protein sorting-associated protein 28 homolog OS=Homo sapiens GN=VPS28 [uniprot-human-120502.fasta]
  • IPI:IPI00328913.2|TREMBL:Q86VK0|ENSEMBL:ENSP00000366565;ENSP00000434556;ENSP00000443686|REFSEQ:NP_898880|VEGA:OTTHUMP00000228917 Tax_Id=9606 Gene_Symbol=VPS28 vacuolar protein sorting-associated protein 28 homolog isoform 2 [ipi.HUMAN.20110912.fasta]
  • Isoform 2 of Vacuolar protein sorting-associated protein 28 homolog GN=VPS28 [Doctor+uniprot-HUMAN-120911.fasta]
  • Tax_Id=9606 Gene_Symbol=VPS28 vacuolar protein sorting-associated protein 28 homolog isoform 2 [human-ipi-270911-contam-BSA.fasta]
  • IPI:IPI00328913.2|TREMBL:Q86VK0|ENSEMBL:ENSP00000366565;ENSP00000434556|REFSEQ:NP_898880|VEGA:OTTHUMP00000228917 Tax_Id=9606 Gene_Symbol=VPS28 vacuolar protein sorting-associated protein 28 homolog isoform 2 [ipi.HUMAN.fasta.20110927]
  • Isoform of Q9UK41, Isoform 2 of Vacuolar protein sorting-associated protein 28 homolog OS=Homo sapiens GN=VPS28 [2016-04-human-contam-aPKC-His-Par6.fasta]
    • Organism: Homo sapiens
    Length: 233 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFHGIPATPG IGAPGNKPEL YEEVKLYKNA REREKYDNMA ELFAVVKTMQ ALEKAYIKDC  60
   61 VSPSEYTAAC SRLLVQYKAA FRQVQGSEIS SIDEFCRKFR LDCPLAMERI KEDRPITIKD 120
  121 DKGNLNRCIA DVVSLFITVM DKLRLEIRAM DEIQPDLREL METMHRMSHL PPDFEGRQTV 180
  181 SQWWVSLPAR QSPAVPETLP ARRSPAVPLR PSAPTCPVLH SQAADPERHV GVR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] PSI-BLAST 32.0 No description for 2cazB was found.
    2 View Details [120..233] PSI-BLAST 30.30103 No description for 2j9wA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle