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Protein Overview: NUDT21

General Information:
Name(s) found: NUDT21 [HGNC (HUGO)]
Description(s) found:
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  • gi|74735411|sp|O43809.1|CPSF5_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor subunit 5; AltName: Full=Cleavage and polyadenylation specificity factor 25 kDa subunit; Short=CPSF 25 kDa subunit; AltName: Full=Pre-mRNA cleavage factor Im [NCBI NR]
  • gi|5901926|ref|NP_008937.1| cleavage and polyadenylation specific factor 5 [Homo sapiens] [NCBI NR]
  • gi|2887288|emb|CAA05026.1| pre-mRNA cleavage factor I 25 kDa subunit [Homo sapiens] [NCBI NR]
  • gi|12655103|gb|AAH01403.1| Nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Homo sapiens] [NCBI NR]
  • gi|119603266|gb|EAW82860.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21, isoform CRA_a [Homo sapiens] [NCBI NR]
  • gi|119603265|gb|EAW82859.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21, isoform CRA_a [Homo sapiens] [NCBI NR]
  • nudix (nucleoside diphosphate linked moiety X)-type motif 21 [HGNC (HUGO)]
  • Cleavage and polyadenylation specificity factor subunit 5 OS=Homo sapiens GN=NUDT21 PE=1 SV=1 [Swiss-Prot]
  • mRNA cleavage factor I 25 kDa subunit [hmr_yeast5_DM3-1_pombe.fasta]
  • cleavage and polyadenylation specific factor 5, 25 kD subunit; pre-mRNA cleavage factor Im (25kD); pre-mRNA cleavage factor Im, 25kD subunit [HMR_022704.fasta]
  • cleavage and polyadenylation specific factor 5, 25 kD subunit [Homo sapiens]gi|12655103|gb|AAH01403.1| Cleavage and polyadenylation specific factor 5, 25 kD subunit [Homo sapiens]gi|2887288|emb|CAA05026.1| pre-mRNA cleavage factor I 25 kDa subunit [Homo [nrdb_11152004_Chlamydomonas]
  • Tax_Id=9606 Cleavage and polyadenylation specificity factor 5 [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • (NM_007006) cleavage and polyadenylation specific factor 5, 25 kD subunit; pre-mRNA cleavage factor Im (25kD); pre-mRNA cleavage factor Im, 25kD subunit [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • cleavage and polyadenylation specific factor 5 [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • Tax_Id=9606 Cleavage and polyadenylation speCifiC faCtor 5, 25 kD subunit; pre-mRNA Cleavage faCtor Im (25kD); pre-mRNA Cleavage faCtor Im, 25kD subunit [EBI-IPI_human_3.12_11-03-2005_con_reversed.fasta]
  • Tax_Id=9606 Pre-mRNA cleavage factor I 25 kDa subunit [EBI-IPI_human_3.04_03-07-2005_reverse.fasta]
  • cleavage and polyadenylation specific factor 5, 25 kD subunit; pre-mRNA cleavage factor Im (25kD); pre-mRNA cleavage factor Im, 25kD subunit [Homo sapiens] [HumanGallus06162005.fasta]
  • Cleavage and polyadenylation specificity factor subunit 5 (Cleavage and polyadenylation specificity factor 25 kDa subunit) (CPSF 25 kDa subunit) (Pre-mRNA cleavage factor Im 25 kDa subunit) (Nucleoside diphosphate-linked moiety X motif 21) (Nudix motif 21 [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • nudix (nucleoside diphosphate linked moiety X)-type motif 21, isoform CRA_a [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • pre-mRNA cleavage factor I 25 kDa subunit [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 PRE-MRNA CLEAVAGE FACTOR I 25 KDA SUBUNIT [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=NUDT21 Cleavage and polyadenylation specificity factor subunit 5 [human-ipi-250309-contam.fasta]
  • Cleavage and polyadenylation specificity factor 5 (Cleavage and polyadenylation specificity factor 25 kDa subunit) (CPSF 25 kDa subunit) (Pre-mRNA cleavage factor Im 25 kDa subunit) (Nucleoside diphosphate-linked moiety X motif 21) (Nudix motif 21) [nr-271106-contam.fasta]
  • IPI:IPI00646917.1|SWISS-PROT:O43809|TREMBL:B2R6U8|ENSEMBL:ENSP00000300291|REFSEQ:NP_008937|H-INV:HIT000283078|VEGA:OTTHUMP00000080385;OTTHUMP00000164317 Tax_Id=9606 Gene_Symbol=NUDT21 Cleavage and polyadenylation specificity factor subunit 5 [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=NUDT21 Cleavage and polyadenylation specificity factor subunit 5 ENSG00000167005 IPI00646917 IPI00552186 [drosphohumanreversed.fasta]
  • Tax_Id=9606 Gene_Symbol=NUDT21 Cleavage and polyadenylation specificity factor 5 [EBI-IPI_human_3.30_06-28-2007_con_reversed.fasta]
  • cleavage and polyadenylation specificity factor subunit 5 [Homo sapiens] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • O43809;Q6IB85;Q6NE84; RecName: Full=Cleavage and polyadenylation specificity factor subunit 5; AltName: Full=Cleavage and polyadenylation specificity factor 25 kDa subunit; AltName: Full=Pre-mRNA cleavage factor Im 25 kDa subunit; AltName: Full=Nucleoside diphosphate-linked moiety X motif 21; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • Cleavage and polyadenylation specificity factor subunit 5 OS=Homo sapiens GN=NUDT21 [011711_HMR.fasta]
  • Cleavage and polyadenylation specificity factor subunit 5 n=12 Tax=Tetrapoda RepID=CPSF5_HUMAN [UniProt_Xenopus_laevis_01-01-2011_reversed.fasta]
  • GeneSymbol=NUDT21 Synonyms=CFIM25|CPSF5|DKFZp686H1588 cleavage and polyadenylation specificity factor subunit 5 [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • IPI:IPI00646917.1|SWISS-PROT:O43809|TREMBL:B2R6U8|ENSEMBL:ENSP00000300291|REFSEQ:NP_008937|H-INV:HIT000283078|VEGA:OTTHUMP00000164317 Tax_Id=9606 Gene_Symbol=NUDT21 Cleavage and polyadenylation specificity factor subunit 5 [ipi.HUMAN.20110912.fasta]
  • Cleavage and polyadenylation specificity factor subunit 5 GN=NUDT21 [Doctor+uniprot-HUMAN-120911.fasta]
  • Nudix (Nucleoside diphosphate linked moiety X)-type motif 21, isoform CRA_a OS=Homo sapiens GN=NUDT21 PE=4 SV=1 [uniprot-human-031015-contam.fasta]
    • Organism: Homo sapiens
    Length: 227 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVVPPNRSQ TGWPRGVTQF GNKYIQQTKP LTLERTINLY PLTNYTFGTK EPLYEKDSSV  60
   61 AARFQRMREE FDKIGMRRTV EGVLIVHEHR LPHVLLLQLG TTFFKLPGGE LNPGEDEVEG 120
  121 LKRLMTEILG RQDGVLQDWV IDDCIGNWWR PNFEPPQYPY IPAHITKPKE HKKLFLVQLQ 180
  181 EKALFAVPKN YKLVAAPLFE LYDNAPGYGP IISSLPQLLS RFNFIYN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..227] PSI-BLAST 109.0 No description for 2cl3A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle