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Protein Overview: gi|110289394

General Information:
Name(s) found: gi|110289394 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|110289394|gb|AAP54582.2| Plus-3 domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 1706 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGGTGPGAE LLSPGEAEWP PELRLPPPPP PHPPPPPPLE PAPPSTPQLR GEASPPPPPP  60
   61 PPVGPPGAAV VAAAARKEAS ASAEGFDDSH FLGSIMGAPA HQHQHQHQQP PAVGPPVVVK 120
  121 RKRGRPPKNR DGAAPPPPPK PVKKREDDED VVCFICFDGG NLVVCDKKGC TKVYHPACIK 180
  181 RDESFFRSRA KWTCGWHLCS TCEKAVQYMC YTCTYSLCKG CIKQKPVKFF GVRGNKGFCD 240
  241 TCYSTILLIE SKDDRAKAKV DFDDKNNWEY LFKLYWLDLK GKHSLTLEEL VNAKSCWTVR 300
  301 STSARREKED SSNDLYDANF DLDASSDGAS RKRRRNSFSG KRGRKRQNNG AESLPKRVQN 360
  361 EGMTFIGDTQ WASSELLEFI GHMRNGDISY ISQFDVQILL LEYVKQKNLR DPRRKSQIIC 420
  421 DARLANLFRK PHVGHFEMLK LLEMHFHAKE TVNGDGQKGI DSDSAQIDSG GYSDMPSKLC 480
  481 SDKRRKIHKK IERESPANLE DYAAIDMHNI NLIYLRRSLL EDLIDDNGTF SDKITGAFVR 540
  541 IRTPCVGQKQ DIYRLVKVLG THKVAERYSV GKKTTDHALE ILNLDKKEVI TMDTISNQDF 600
  601 TEEECKRLRQ SMKCGLITRL KVVLLIKIHY TGDIHEKAKI FQLLRVNDWL ENEKQRLSHL 660
  661 RDRASETGRR KQYPFNLIKD LHAYGHHRLI YEAFNSYHHC EIIICMRIHF FMHTLLMEYV 720
  721 ECVEKLQLLG TPEERARIIN EDPEVHVDPC MSPDYESAEE LDVKKAVDST SRNGSDLLFL 780
  781 GRKGIETNSL QNHRQNCSAT SHHTTTSPPT EGMTHGQGEE ASFASSEIVS GDMEPEKVWH 840
  841 YKDPSGSVQG PFTLLQLSKW AAYFPRDLRI WLTFESEQNS LLLTEVLSKQ QKDFIQPSPK 900
  901 VDNNRSTWEG VGQDRVDSSL TGNNSSSPIG YNVIYSSRLP SPSADYCASA REGPNLPSGT 960
  961 LPFMTSQKTQ KDPQMLHGQA QHQGDYSCTI PSSVVSYRPA GSHDEWPPRG NIGEWNNSQD1020
 1021 SGGMWSPTTP HMSRSNLEHQ PDRCITKKQL QNDSKRNTLA GSAENLNSQM DFGSQKVHIP1080
 1081 TPQQPERDLA TSVGTSRQFE FKTCHQEGSH WSSTADSITH DGLQLSLASA KPESCSAVNP1140
 1141 IRDGDSSSAS RVPNQSGAHV YSPPHPATTN LSKSEETMNQ CKSCEPEASN KSRKPDASHA1200
 1201 PVNQHPKPES DPLLPDTQDF ERTHPSPSTE HDTKEPLKDQ SRSTSVAPEG SGTMAHGQSS1260
 1261 IAFISEASGP LSSKIVGLQP PKDTSFLVEK DIKDGGSITQ TEQQKEESTA FKKENVAVDP1320
 1321 ISDSEAIVSG VLESLTETYN LHEETALENF TPTSAEEEQP QCSTPIALSP WDETSDYQGE1380
 1381 AVDSALWGVQ DDQNNEMWSL SSPTPTLQPS GIGADTKGAS CAIEEVIVAQ GNSGVVEPSP1440
 1441 ALEKKRIEKV KPKSDAALSP EESRKPSGLQ LSSTYLQGST KSSGTSLEWG TKISGVQSSA1500
 1501 SSLEGSKKAF VRQPSGSSLE GNTKASEKLQ HGNHQVLRLL QGAQKHQVGS HHLARARNLS1560
 1561 LIPHGVPAKA ATRLRTNQQH QQLNTHQKPQ GDKETTTQIL LAGETLSETR AGIHPQAMRA1620
 1621 AEAAILATTM TGTIRAANHG VVAQIIPGDQ IIVKNMATVA RRDHRRRGGN LKGGSVDTTR1680
 1681 MATAGRALPA SSSTVENALT FLYSPK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] deduced N/A No confident structure predictions are available.
    2 View Details [80..430] PSI-BLAST 10.045757 No description for 2ro1A was found.
    3 View Details [431..531] deduced N/A No confident structure predictions are available.
    4 View Details [532..767] deduced N/A No confident structure predictions are available.
    5 View Details [768..926] deduced N/A No confident structure predictions are available.
    6 View Details [927..997] deduced N/A No confident structure predictions are available.
    7 View Details [998..1072] deduced N/A No confident structure predictions are available.
    8 View Details [1073..1204] MSA 3.335987 View MSA. No confident structure predictions are available.
    9 View Details [1205..1382] deduced N/A No confident structure predictions are available.
    10 View Details [1383..1480] deduced N/A No confident structure predictions are available.
    11 View Details [1481..1706] MSA 1.304992 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle