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Protein Overview: gi|110289306

General Information:
Name(s) found: gi|110289306 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|110289306|gb|AAP54387.2| hAT family dimerisation domain containing protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 756 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPSPPLSS DDDARDANAE LDQPSHAISA AAAAAATPAV VPVAGSAIVH VGRSGSSNSG  60
   61 AKACCRPPQP PIKRTTTRSK SRLAIAGAPS ASTKAGAPSA QELQKLHLPP TACAYSNPWD 120
  121 LPRIQLLDFK KVKVCGDVKA ECLHCHKRLG GKSSNGTSHL HDHLKICTLR KIKMGPKTLA 180
  181 QSSLRFNSVE GGKVSVDTYT FDPAVARREL AAMIILHEYP LSIVDHIGFR RFVSALQPLF 240
  241 KMVTRNTIRK DIMDTYEEEK KRALAYMAGA KSRVGITTDL WTSDNQKRGY MAITAHFIDD 300
  301 SWTLRSIIMR FIYVPAPHTA EVICEHLYEA LVEWNLDEKI STLTLDNCTT NDKVISELIK 360
  361 KIGKRKLMLE GKLLHMRCAA HILNLIVRDG LDVIKDSIAK VRESVAFWTA TPKRVEKFEE 420
  421 IAKHVKVKME NKLGLDCKTR WNSTYRMLSI ALPCARAFDR ATRVEKLFDC APSEEEWAFA 480
  481 SEVVDRLKLF NDITAVFSGT NYVTSNIQLL KICEAKEQIR KWAVCGDSTI EEMSVEMIQK 540
  541 FDKYWKDIQG PMGLATILDP RFKIDYLLGF IETITGQSSE ECATKVAEVK DTLYDLMKEY 600
  601 EVEDDEDNTE SSAPPLVNSD LLSSITARVT SRRPAAIRVK SELDRYLEDE LVSINTENFK 660
  661 ILDWWKVAGT SFPTLRKVAR DIFAIPVSTV ASESAFSTSG RVLSEHRSRL TPELLEALMC 720
  721 SQDWLRNKYR ADNEEAASFW SCLQDIQDRI EGLALV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] MSA 33.150996 View MSA. No confident structure predictions are available.
    2 View Details [113..196] FFAS03 3.21 No description for 2djrA was found.
    3 View Details [197..756] PSI-BLAST 44.30103 Three-dimensional structure of the Hermes DNA transposase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.722279828632226 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29272620969648 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.24934115119652 bayes_pls_golite062009
  • nuclease activity
    		•  0.239989310123501 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.74

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle