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Protein Overview: gi|110289233

General Information:
Name(s) found: gi|110289233 [NCBI NR]
Description(s) found:
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  • gi|110289233|gb|ABG66132.1| CER1 protein, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • CER1 protein, putative, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 595 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATNPGLFTE WPWKKLGSFK YVLLAPWVAH GWYEVATKGW REVDLGYIAI LPSLLLRMLH  60
   61 NQAWITISRL QNARGRRQIV RRGIEFDQVD RERNWDDQII LSGILLYLGA LYVPGGQHLP 120
  121 LWRTDGAGLI ALLHAGPVEF LYYWFHPVIH PFAELVAYEL LFSIPLIACA LTGTASIIAF 180
  181 EMYLIYIDFM NNMGHCNFEL VPSWLFTWFP PLKYLMYTPS FHSLHHTQFR TNYSLFMPFY 240
  241 DYIYNTMDKS SDTLYENSLK NNEEEEAVDV VHLTHLTTLH SIYHMRPGFA EFASRPYVSR 300
  301 WYMRMMWPLS WLSMVLTWTY GSSFTVERNV MKKIRMQSWA IPRYSFHYGL DWEKEAINDL 360
  361 IEKAVCEADK NGAKVVSLGL LNQAHTLNKS GEQYLLKYPK LGARIVDGTS LAAAVVVNSI 420
  421 PQGTDQVILA GNVSKVARAV AQALCKKNIK VTMTNKQDYH LLKPEIPETV ADNLSFSKTG 480
  481 TAKVWLIGDG LDSAEQFRAQ KGTLFIPYSQ FPPKMVRKDS CSYSTTPAMA VPKTLQNVHS 540
  541 CENWLPRRVM SAWRIAGILH ALEGWNEHEC GDKVLDMDKV WSAAIMHGFC PVAQG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] MSA 2.453987 View MSA. No confident structure predictions are available.
    2 View Details [100..246] Pfam 4.39794 No description for PF04116.4 was found. No confident structure predictions are available.
    3 View Details [247..455] deduced N/A No confident structure predictions are available.
    4 View Details [456..595] MSA 3.017949 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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