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Protein Overview: gi|115481276, gi...

General Information:
Name(s) found: gi|222612504 [NCBI NR]
gi|215768487 [NCBI NR]
gi|115481276 [NCBI NR]
gi|113638840 [NCBI NR]
gi|110288675 [NCBI NR]
Description(s) found:
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  • gi|222612504|gb|EEE50636.1| hypothetical protein OsJ_30846 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215768487|dbj|BAH00716.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115481276|ref|NP_001064231.1| Os10g0170000 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113638840|dbj|BAF26145.1| Os10g0170000 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|110288675|gb|ABG65938.1| Nucleotide-sensitive chloride conductance regulator family protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • Nucleotide-sensitive chloride conductance regulator family protein, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • Os10g0170000 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 225 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLGLYAFAD IAADGAPHLN SAAGEELVRV ERAAAVALGS RAPEPPGTLF ITTRRVIWVS  60
   61 EVEKGKAYAV DFLAVSLHAV SRDPEAYSSP CIYTQIETED GSDEESDESD SEVNVETELS 120
  121 KVTEMRIIPS DPCQLDGLFE AFSHCAELNP DPNAESDEEN GWAHRDEGDE DMTGGSDAEC 180
  181 EFSDVNPIGQ TDEHDITHAV VELQINDQRF EDAEEAEHET HGNGH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..167] PSI-BLAST 39.39794 Solution structure of ICLN, a multifunctional protein involved in regulatory mechanisms as different as cell volume regulation and rna splicing
    2 View Details [168..225] MSA 1.038993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle