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Protein Overview: gi|255670398, gi...

General Information:
Name(s) found: gi|255670398 [NCBI NR]
gi|108862841 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|255670398|dbj|BAF30065.2| Os12g0565200 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108862841|gb|ABA98976.2| NB-ARC domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 994 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWGQSATAAV DFAANPLHSV PAASVMTRPS RPVKKPLGDS LSCAPQNTRI IDLGGEMASA  60
   61 LTGAMTSVII KLSALLGEEY AKLKGLQREV EFMKDELSSM NALLHRLAEV DSDLDVQTEE 120
  121 WRNQVREMSY DIEDCIDGFT HRLGHIGIAE AAGPVQRVAQ QLKVLKVRRQ IASQIQELKG 180
  181 RVEDASKRRM RYKLDDRIFE PSIARAIDPR LPSLYAESDG LVGIETPRAV LVKLIMEGDD 240
  241 ASFQQLKVIS IVGPGGLGKT TLANEVYRRL EGQFQCRAFV SLSQQPDVKR ILRNIFCQVS 300
  301 QQVYDSTSVW DEENLIDAIR GFLKDKRYFI VIDDIWSIQA WKTIKCALLM NNLGSRIITT 360
  361 TRSVTIAKSC CSPQHDHVYE IMPLSTANAM SLFLKRIFGT EDICPPQLEE ISCKILKKCS 420
  421 GSPLAIITIA SLLTNKASTK EEWERVHNSI GSTLEKDPSV EEMQRILSLS YDDLPHHLKT 480
  481 CLLYLCIFPE DCEIERDQLV KRWIAEGFIN TGSGQDLEKI GESYLNDLIS RSMIQPVKVR 540
  541 YDGQVDSCRI HDMILDLLMS KSIKENFATF LGEQNQKLVL QGKVRRLSLS YYSQENVMVP 600
  601 STAIISSCRS LSIFGYAEEM PSLSEFRVLR VLDIEHGEDM DSNYLEHVRR LSQLKYLRLN 660
  661 VRSIDALPEQ LGELQHLQTL DLVSTKLRKS PKSIVRLQNL TCLRINNLEL PEGIGCMRAL 720
  721 QEVSEIKISR NSSASSLQEL GNLTKLKILG LCWCISDIHG GTKTLVNNLV SSLRKLGRLN 780
  781 LRSLCIQSSF KYSIDFLLDS WLPTPHLLQK FQMGMCYYFP RIPVWIASLE NLTYLDINLN 840
  841 PVKEEVLEIL GNLPALLFLW LTSKSADPKQ RLIINSNMFM CLKELYFTCW SIESGLMFQE 900
  901 GCMAKLEKLH LPFHAATALE FGIHHLSSLR LLVVEIICSG ATIRQVESLE ETIRKTADLL 960
  961 PYRPTVEIRT WDEENMVEEQ KEKDMGEEGT QTSC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] deduced N/A No confident structure predictions are available.
    2 View Details [110..605] PSI-BLAST 12.39794 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [606..994] PSI-BLAST 16.69897 The molecular structure of toll-like receptor 3 ligand binding domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.54

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle