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Protein Overview: gi|108862831

General Information:
Name(s) found: gi|108862831 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|108862831|gb|ABA98957.2| ribosomal protein S6 containing protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 317 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEATAAPRPL SLLARQPQPQ PQQLRLRLQR VAAFTGVGGG GRRLMVAAAA KKRRGKGGEG  60
   61 EEEEERVDTH SFAPKAGEAT GPFPEAVLLR KKMVKDDGQV APEFADADEE KLYEFLNIQM 120
  121 ESDLNLKRMR HYEVVYLIHE DRVEEVEDVV SKVQDFVREK KGRIWRLNNW GLRRLAYKIK 180
  181 KARHANYILM NFEIQAKYIN DFKTLLDKDE RIIRHLVMKR DEAITEDCSP PPEFHTLRAQ 240
  241 QQYMDDEYID DEDDGKEEQE PEEDWDDKGE MENAGYEDDD EPEIILVDEV ERDNNENIRR 300
  301 RNRTMKVEKY AAEKVLR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] deduced N/A No confident structure predictions are available.
    2 View Details [129..317] PSI-BLAST 41.69897 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of ribosome
    		•  3.76170790689216 bayes_pls_golite062009
  • structural molecule activity
    		•  3.47672166437086 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle