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Protein Overview: gi|108862495, gi...

General Information:
Name(s) found: gi|222616921 [NCBI NR]
gi|215678672 [NCBI NR]
gi|115488202 [NCBI NR]
gi|113649095 [NCBI NR]
gi|108862495 [NCBI NR]
Description(s) found:
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  • gi|222616921|gb|EEE53053.1| hypothetical protein OsJ_35788 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215678672|dbj|BAG92327.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115488202|ref|NP_001066588.1| Os12g0286600 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113649095|dbj|BAF29607.1| Os12g0286600 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108862495|gb|ABA97491.2| expressed protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • Os12g0286600 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • expressed protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 377 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGVTSSVAA KMAFFPPTPP SYALVDDPAA GVTTMTGQPH RENVEVLRLR TRRGNTVAAV  60
   61 YVRHPDAATT LLYSHGNAAD LGHLYQLFLH LSFNLRVNVL GYDYSGYGQS SGKPSEHNTY 120
  121 ADIEAAYKCL IENFGAKEEE IILYGQSVGS GPTVDLASRL HRLRAVVLHS PILSGLRVMY 180
  181 PVKRTYWFDI YKNIDKIPQV TCPVLIIHGT ADEVVDWSHG KQLWELCKEK YEPLWLKGGK 240
  241 HCDLELFPEY LRHLKKFVNT VEKSPSPRNA WRESLDRIEP SRKSVDCFEP SRRSVDFFEP 300
  301 SRKSTDRREK SRPTRDRMRG VEHRYSNVEK TDKLKFSFDH MEKSRRSIDI FERPKKNIEQ 360
  361 LDCGRKSVDR LDRIWAS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..377] PSI-BLAST 22.69897 Epoxide hydrolase, N-terminal domain; Mammalian epoxide hydrolase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.629869101256762 bayes_pls_golite062009
  • hydrolase activity
    		•  0.512422589119661 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.60

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle