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Protein Overview: gi|108711940, gi...

General Information:
Name(s) found: gi|222626115 [NCBI NR]
gi|108711940 [NCBI NR]
Description(s) found:
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  • gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • glycoside hydrolase family 28 protein, putative, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 460 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGTQWSNVS STYCKDMASS VYRPHSVTIT EFGAVGDGVT LNTKAFQNAI FYLNSFADKG  60
   61 GAQLFVPAGR WLTGSFSLIS HLTLSLDKDA EIIGSPDSSD WPVIDPLPSY GRGRELPGKR 120
  121 HQSLIFGTNL TDVIITGANG TIDGQGAIWW DWFHSNTLNY TRPHLVELMY STDVVISNLT 180
  181 FKNSPFWNIH PVYCSQVLVQ HVTILAPLNS PNTDGIDPDS STNVCIDHCY VRNGDDVIVI 240
  241 KSGWDEYGIS FARPSTNISI SNITGETRGG AGIAFGSEMS GGISEVRAEG LRIVNSMHGI 300
  301 RIKTAPGRGG YVKNVYISDV SMDNVSMAIR ITGNFGEHPD DKYDRNALPM ISNITIENVV 360
  361 GVNVGVAGIL EGIEGDNFSS ICLSNVSLSV QSMHPWNCSL IEGYSNSVIP ESCEQLRTDC 420
  421 GQTPICYDGG SSSAIHAQAA RHRLSSASRL LNPLLKLAML

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..460] PSI-BLAST 58.154902 No description for 2uveA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle