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Protein Overview: gi|108711429

General Information:
Name(s) found: gi|108711429 [NCBI NR]
Description(s) found:
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  • gi|108711429|gb|ABF99224.1| expressed protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • expressed protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 943 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREEVRSSSG AAAEPPPTPV ASSAGPSSPA MQANVASIDW SGSRQASRVD SSSHVAPHAH  60
   61 QPSHSFDATG TALDSAPSCR PWERGDLLRR LATYKPTTWA SRPKAASSLA CARRGWVNVD 120
  121 MDKIECESCG AHLIFSTLTS WSPAEVSNAG EAFAEQLDAS HHNSCPWRGN SCADSLVQLH 180
  181 LTQSALIGGF KDRCDGLLQF TSLPVIASSA IEHMRLTRSS QIDRLLSQSI TFLSGELSYK 240
  241 AESTTGIDIQ QDSSCSYSKA RKLISLCGWE PRWLPNVQDC EENSTHSAKN ADSVEPFFPR 300
  301 FAEHQKNSFS GSAKKDKGKG KRPLKDSGCS MRSPLLDCSF CGSTVKIWDF RSVSRPCRFS 360
  361 PNNIDAPETG KKLALTRGIS AASGINEWVT DGMERDPAEG RDEEATNEGK SLSNAGVDLN 420
  421 LTMAGGLPSI QSSIPIASER FNGGLGRDLM IGQPTGSEVG DHATSYESRG PSSRKRNHEE 480
  481 GGSTVDKPQD RLQHADSIEG SVIDRDGEEV DDAAQDSDIP NKRSRGFDLF GSYLPSSSGA 540
  541 GPSRNFCFDP DADAGKFSHA RAAGLAAVDR DSMRESSVAA MDTVHSADED SMESVEYYPG 600
  601 DGNDIDMPSS SAHRNIEMDD VLGLNYSNQA QQSACVQPAS GSDGREIGGS STNEGEEVLD 660
  661 AVTAPAFARD QLSVGISGGS VGMGASHEAE IHGIDVSLQR AESVVGDAEP NTELTETMGH 720
  721 TGESVPGPGL MDEFVPDEVD RQEPHGDSQD MVSQSVGQAD SGSKIYGSTK ADSVESGEKI 780
  781 GGHAVGHASR MHPSLSCNAG MQTGLDVSKE EVTQAGKLLI AGDVPMGLDY DPQNGLGATN 840
  841 GENDFESGLP EFDPVKHHNS YCPWVNGTVA AACCSNTESS SSSSPLSGWQ LTVDALDTFQ 900
  901 SLGQAQNHAM RSDSAASLYM DDHVTPNHKL ARRASVSRSH GKC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..270] Pfam 60.376751 No description for PF07967.5 was found. No confident structure predictions are available.
    2 View Details [271..411] deduced N/A No confident structure predictions are available.
    3 View Details [412..534] deduced N/A No confident structure predictions are available.
    4 View Details [535..780] deduced N/A No confident structure predictions are available.
    5 View Details [781..943] MSA 1.003928 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.75

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle