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Protein Overview: gi|108710949, gi...

General Information:
Name(s) found: gi|108710949 [NCBI NR]
gi|108710947 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|108710949|gb|ABF98744.1| NOT2/NOT3/NOT5 family protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|108710947|gb|ABF98742.1| NOT2/NOT3/NOT5 family protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 624 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGLLNSNLN NSASNLQDSS GRPFTASFSG QSGSVPGAFH HSGLHNIHAN FNLPNMPGSL  60
   61 AQRNAAMSGL PSSGVQQPGG SISARFASNN LPVGMSQLPH GHSGVSSRVN VGGGPAFSSS 120
  121 LNIGGTIQGL SSNLGAGGNR NSVPGMSVSP ALGNLGPRIT GSVGNIVGGS NIGRNISSGG 180
  181 LSVPSIASRM NLSGNIGSGG LNVQGSSRMM NGILQQGSPQ MMNMMGSSYP TSGGSLSQNQ 240
  241 IQGGNNSLGS MGMLHDANDS APYDMNDFPQ LTGRPSSAGG PQGQYGSLRK QGVGVNTIVQ 300
  301 QNQEFSIQNE DFPALPGYKG STSDYAMELH HKEQLHDNVP VMQAQQYPMS RSVGFNLGSN 360
  361 YPPNRQQHQQ GANSVQNAGP QNIGLRSSAS QTSSLGSYEQ LIQQYQQPQT QNPFRLQQVS 420
  421 SATQSYRDQS LKSIQGGQTP PDPYGLMGLL GVIRMNDADL ASLALGMDLT TLGLNLNSPD 480
  481 NLYKTFGSPW SNEPAKGEPE FHIPACYNAE QPPPLQPIHF QKFQTLTLFY IFYSMPRDEA 540
  541 QLCAASELYN RGWFYHKEVR VWLTRIPNVE PLVKTPHYER GSYGCFDPNN WETIRKDNFV 600
  601 LHYDQIEKKP AIPSSSQTVR GNIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..506] PSI-BLAST 25.69897 No description for 1y0fB was found.
    2 View Details [507..624] Pfam 31.69897 No description for PF04153.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle