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Protein Overview: gi|108707310, gi...

General Information:
Name(s) found: gi|222624609 [NCBI NR]
gi|108707310 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|222624609|gb|EEE58741.1| hypothetical protein OsJ_10226 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108707310|gb|ABF95105.1| Vacuolar sorting protein 9 domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 480 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGGGGGDAF GSATAPLAWH DFLERMRQPS AADFVKSIKG FIVTFSNRAP DPEHDSAAVQ  60
   61 EFLENMEGAF RAHTPWAGSS EEELESAGEG LEKYVMTKLF NRVFASVPED VKSDEELFEK 120
  121 MSLLQQFIRP ENLDIKPEYQ SETSWLLAQK ELQKINMYKA PRDKLACILN CCKVINNLLL 180
  181 NASIVSNENP PGADEFLPVL IYVTIKANPP QLHSNLLYIQ RYRRQSRLVS EAQYFFTNIL 240
  241 SAESFIWNID GESLSMDERD FQKKMDLARE RMLGLSASSE NQDNQNNLDV REQKSQTLKA 300
  301 SRDSDVNLSL KDNFQGPGLE MRRDSDASSN PVERVQSISD LEKKGAAELL KDDDLNKKIQ 360
  361 EYPFLFARSG DLTVADVENL LNSYKQLVLK YVALSQGMGI NLENPPVQSM QTVSDLVESE 420
  421 EPKNVKNAVN FSEGSSKTSD DIKNDTLYSE VDNTGTQQTA VDPSYQKAQQ DEASDQPEHA 480
  481

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..306] PSI-BLAST 65.154902 Crystal Structure of the Vps9 Domain of Rabex-5
    2 View Details [307..480] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle