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Protein Overview: gi|108705820

General Information:
Name(s) found: gi|108705820 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|108705820|gb|ABF93615.1| expressed protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 689 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTLTPTQR YAAGALLALA LRQAQIHQSV LLGAHHHHDD DDEEQGRTST SSGGGGGSSS  60
   61 SSSNSGAGAD ADLWTHDSHG LLRPVFRFLE IDPKAWSGLE ETAASSEAKH HIGAFLRIIF 120
  121 EEDGESSSDR SVQELALAKG VDVMVMSLGN DSEVGNTIKG GDQDALPSSS GTDKSPGESS 180
  181 HDDQLGINKL TLDDIPANNH RKMALLFALL SACVADKPVS QEEEDRKSTR FRKGYDARHR 240
  241 VALRLLSTWL DVKWIKMEAI EVMVACSAMA AAKEQEQSQE SASPKSKWEK WKRGGIIGAA 300
  301 ALTGGALLAI TGGLAAPAIA AGFGALAPTL GTLVPVIGAS GFAAMATAAG SVAGSVAVAA 360
  361 SFGAAGAGLT GSKMARRIGS VKEFEFKPIG ENHNQGRLAV GILISGFAFD EDDFCRPWEG 420
  421 WQDNLERYIL QWESKHIIAV STAIQDWLTS RLAMELMKQG AMRTVLSGLL AAFAWPATLL 480
  481 AATDFIDSKW SVAIDRSDKA GKMLAEVLLK GLQGNRPVTL IGFSLGARVI FKCLQELALS 540
  541 SDNEGLVERV VLLGAPVSVK GERWEAARKM VAGRFVNVYS TDDWILGVTF RASLLTQGLA 600
  601 GIQAIDVPGV ENVSIWGAIL VFLRDFHLSF TRLCVQCNLQ VDVTELVDGH SSYLSAAQQI 660
  661 LEHLELNTYY PVFVPLSAAN EETDGTVAQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..232] deduced N/A No confident structure predictions are available.
    2 View Details [233..408] FFAS03 1.05 CLASS II AMINOACYL TRANSFER RNA SYNTHETASES: CRYSTAL STRUCTURE OF YEAST ASPARTYL-TRNA SYNTHETASE COMPLEXED WITH TRNA ASP
    3 View Details [409..487] deduced N/A No confident structure predictions are available.
    4 View Details [488..622] MSA 7.058987 View MSA. No confident structure predictions are available.
    5 View Details [623..689] MSA 1.044991 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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