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Protein Overview: SF3B5

General Information:
Name(s) found: SF3B5 [HGNC (HUGO)]
Description(s) found:
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  • gi|56202779|emb|CAI19755.1| splicing factor 3b, subunit 5, 10kDa [Homo sapiens] [NCBI NR]
  • gi|23336896|tpg|DAA00073.1| TPA_exp: SF3b10 [Homo sapiens] [NCBI NR]
  • gi|20140757|sp|Q9BWJ5.1|SF3B5_HUMAN RecName: Full=Splicing factor 3B subunit 5; Short=SF3b5; AltName: Full=Pre-mRNA-splicing factor SF3b 10 kDa subunit [NCBI NR]
  • gi|189065292|dbj|BAG35015.1| unnamed protein product [Homo sapiens] [NCBI NR]
  • gi|13775200|ref|NP_112577.1| SF3b10 [Homo sapiens] [NCBI NR]
  • gi|12652885|gb|AAH00198.1| Splicing factor 3b, subunit 5, 10kDa [Homo sapiens] [NCBI NR]
  • gi|119568236|gb|EAW47851.1| splicing factor 3b, subunit 5, 10kDa [Homo sapiens] [NCBI NR]
  • splicing factor 3b, subunit 5, 10kDa [HGNC (HUGO)]
  • Splicing factor 3B subunit 5 OS=Homo sapiens GN=SF3B5 PE=1 SV=1 [Swiss-Prot]
  • (Q9BWJ5) Splicing factor 3B subunit 5 (SF3b5) (Pre-mRNA splicing factor SF3b 10 kDa subunit) [Swiss-Prot]
  • Splicing factor 3B subunit 10 [hmr_yeast5_DM3-1_pombe.fasta]
  • SF3b10 [HMR_022704.fasta]
  • SF3b10 [Homo sapiens]gi|23336896|tpg|DAA00073.1| TPA: SF3b10 [Homo sapiens]gi|12652885|gb|AAH00198.1| SF3b10 [Homo sapiens]gi|20140757|sp|Q9BWJ5|S3B5_HUMAN Splicing factor 3B subunit 5 (SF3b5) (Pre-mRNA splicing factor SF3b 10 kDa subunit) [nrdb_11152004_Chlamydomonas]
  • Splicing factor 3B subunit 5 (SF3b5) (Pre-mRNA splicing factor SF3b 10 kDa subunit) [Yateslab_human_na_07-28-2006_reversed.fasta]
  • Tax_Id=9606 Splicing factor 3B subunit 5 [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • (NM_031287) hypothetical protein MGC3133 [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • SF3b10 [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • Splicing factor 3B subunit 5 (SF3b5) (Pre-mRNA-splicing factor SF3b 10 kDa subunit) [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • unnamed protein product [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • splicing factor 3b, subunit 5, 10kDa [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Splicing factor 3b, subunit 5, 10kDa [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • TPA_exp: SF3b10 [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 SPLICING FACTOR 3B SUBUNIT 5 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=SF3B5 Splicing factor 3B subunit 5 [human-ipi-250309-contam.fasta]
  • splicing factor 3b, subunit 5 [Homo sapiens] [NCBI-RefSeq_Human_na_02-15-2010_reversed.fasta]
  • IPI:IPI00010404.1|SWISS-PROT:Q9BWJ5|TREMBL:B2R568|ENSEMBL:ENSP00000356541|REFSEQ:NP_112577|H-INV:HIT000015197|VEGA:OTTHUMP00000017343 Tax_Id=9606 Gene_Symbol=SF3B5 Splicing factor 3B subunit 5 [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=SF3B5 Splicing factor 3B subunit 5 ENSG00000169976 IPI00010404 [drosphohumanreversed.fasta]
  • splicing factor 3B subunit 5 [Homo sapiens] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • Q9BWJ5;B2R568;Q7RTV1; RecName: Full=Splicing factor 3B subunit 5; AltName: Full=Pre-mRNA-splicing factor SF3b 10 kDa subunit; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • Splicing factor 3B subunit 5 OS=Homo sapiens GN=SF3B5 [011711_HMR.fasta]
  • IPI:IPI00010404.1|SWISS-PROT:Q9BWJ5|ENSEMBL:ENSP00000356541|REFSEQ:NP_112577|H-INV:HIT000015197|VEGA:OTTHUMP00000017343 Tax_Id=9606 Gene_Symbol=SF3B5 Splicing factor 3B subunit 5 [ipi.HUMAN.fasta.20100406]
  • GeneSymbol=SF3B5 Synonyms=MGC3133|SF3b10|Ysf3 splicing factor 3B subunit 5 [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • Splicing factor 3B subunit 5 GN=SF3B5 [Doctor+uniprot-HUMAN-120911.fasta]
    • Organism: Homo sapiens
    Length: 86 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDRYTIHSQ LEHLQSKYIG TGHADTTKWE WLVNQHRDSY CSYMGHFDLL NYFAIAENES  60
   61 KARVRFNLME KMLQPCGPPA DKPEEN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] Pfam 62.376751 No description for PF07189.2 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle