Protein Overview: gi|109509427, gi...

General Information:
Name(s) found:	gi\|109510024 [NCBI NR] gi\|109509427 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|109510024\|ref\|XP_001080424.1\| PREDICTED: similar to jumonji domain containing 1C [Rattus norvegicus] [NCBI NR] gi\|109509427\|ref\|XP_228122.4\| PREDICTED: similar to jumonji domain containing 1C [Rattus norvegicus] [NCBI NR] PREDICTED: similar to jumonji domain containing 1C [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Jmjd1c similar to jumonji domain containing 1C [rat-ipi-250309-contam.fasta]
Organism:	Rattus norvegicus
Length:	2615 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRTKGTSTC AFRVANISSH TGPSWLGRIR SPAGLPRSAS AEPAQGGAAQ RGPREREREP  60
   61 QPGARRGAEQ SPPRAAPGSG GAEEPRRAAE ERRGGRGEAE QSPPRVGERL HGAEPAIRPP 120
  121 GSLPARALLF PTPPPRSPAA TRTRVYVEFD DLEWDKREWV KVYEDFSTFL VEYHLIWAKR 180
  181 KDPSQTQGSK SRQIQWPALT FKPLVENSIP SSVTAVEFLI DKQVDFLTEE SAFQLYQDDI 240
  241 DSLKPELRDN PQLHAEVKVW VKEQKVQEIF MQGPYSLNGY RVRVYRQDSA TQWFTGIITH 300
  301 HDLFTRTMIV MNDQVLEPQN VDPSMVQMTF LDDVVHSLLK GENIGITSRR RSRASQNIST 360
  361 VHGHYTRAQA NSPRPAMNSQ AAVPKQNTHQ QQQQRSIRPS KRKGSDSSAP DEERMKGDKY 420
  421 DYGSRGENPK GKNKHMVTKR RKPEEDEKRL TMKRLRTDNA SDASESSDSE NSSKRITENS 480
  481 SEQTPEYELK NKITSKINGE DGQPQAAEKA GEEILIDTRP HWDQMQEDKN HEEGEKLKSM 540
  541 DSHLQDKITL RASEQATDAD PNSNDSVLQE CNMENQRTVE LPSKDRVVSR TPTPKCAMDI 600
  601 KNDTHSERAA QEKSNTFGLQ IPENMDSNVS DSKHSNAKYL EAAKKDCDQS WVSDVVKVDL 660
  661 TQSSTTNTPS GNDNREMEKE RNHYVSYMSS LSTVSVTEDQ LHKRSPPPET IRSKLTTSVD 720
  721 TQKTKSSSSP EVFKPKVTHS PDSVKSRAAY GNSQAAGERR QASKAEHELS RGSFHAAPTR 780
  781 GSALETTKSP LIIDKNEHFT VYRDPALIGS EAGANHISPF LSQHPFPLHS SSHRTCLNPG 840
  841 SHHPALTPGP HLLAGSSSQT PLPTINTHPL TSGPHHPVHH PHLLPTVLPG VPTASLLGGH 900
  901 PRLESAHTGS LSHLALAHQQ QQLLQHQSPH LLGQAHPSAS YNQLGLYPII WQYPNGTHAY 960
  961 SGLGLPSSKW VHPENAVNAE ASLRRNSPSP WLHQPTPVTS ADGIGLLSHI PVRPSSAEPP1020
 1021 RPHKMTVHSS PPLTKTLADH HKEELERKAF MEPLRSNAST SVKGDLDLNR SQAGKDCHLH1080
 1081 RHFVGPRLPP ETGERLNKYK EEHRRILQES IDVAPFTTKI KGHEVERENY SRVVPSSSSP1140
 1141 KSHAIKPDKD MDRSVSELYK MKHSVSQSLP QSNYFTTLSN SVLNEPPRSY PSKEVSSIHT1200
 1201 EKQNSNLSAA ANPQTLSFIS SLSKPPPLIK HQPESESLVG KVPDHLPHQS ASHSVTTFRS1260
 1261 DCRSPTHLTV CSTNALRSMP ALHRAPVFHP PIHHSLERKE SSYSSLSPPT LTPVMPVNAG1320
 1321 GKAQESQKPP TLIPEPKDSQ ADLKSSDQSL VEVWRSNNLS KEKAEWPVEK NSGKSQAAVA1380
 1381 SVIVRPPSST KVDSVPSGPL AAKDRVCERA SSGANKTDYL KPEAGETGRI LLPNVNLESA1440
 1441 HVKSEKNFEA ASQGSVPVSV MSAVNVVSAT QTDVLTSAGP TTSVSSLAGS EATYSLSNII1500
 1501 SASTPLECPS SKSVSQSVAQ AKGCKVSTPV PVTLACSKTA NAVQPGSGFS GTTDFIHLKK1560
 1561 HKAALAAAQY KNSNVSEAEL NTVRNQTAAA SLPLDSTMTC AASNKAVSVG NGPAAQPSQP1620
 1621 NYHTKLKKAW LTRHSEEDKN TNKMENSGTC VSEMIKPCSV NLIASTSSDI QNSVDGRVTV1680
 1681 DKYGRDEKAS RRKAKRTYES GSESADSDGS ESKAEQRTKR QPKPTYKKKQ NDLQKRKGEI1740
 1741 EEDLKPNGVL SRSAKEKSKL KLQNSSSAGV PRSVLKDWRK VKKLKQTGES FLQDDSCCEI1800
 1801 GPNLQKCREC RLIRSKKGEE STHSPVFCRF YYFRRLSFSK NGVVRIDGFS SPDQYDDEAM1860
 1861 SLWTHENYED DDIDVETSKY ILDIIGDKFC QLVTSEKTAL SWVKKDAKIA WKRAVRGVRE1920
 1921 MCDACEATLF NVHWVCRKCG FVACLDCYKA KERKSSRDKE LYAWMKCVKG QPHDHKHLMP1980
 1981 TQIIPGSVLT DLLDAMHVLR EKYGIKSHCH CANRQNLQGG NVPTMNGVSQ VLQNALHHSN2040
 2041 KTSACPPESQ QQSTPQRAQA NGSSSPGSAS TDSRLTPPES QSPLHWLADL AEQKSREEKQ2100
 2101 ENKEFTLEKE IKEDEEQDTP DSPNGSTSPP ASQNSEQGST LRDLLTTTAG KLRVGSTDAG2160
 2161 IAFAPVYSMG ASSGKGGRTM PNILDDIIAS VVENKIPPNK TSKINVKSEP NEEPKESRQS2220
 2221 ATNESNKFYR DIPHTWICDQ HVLWLKDYKN SNNWKLFKEC WKQGQPAVVS GVHKKMNVSL2280
 2281 WKAESISLDF GDHQADLLNC KDSIVSNANV KEFWDGFEEV SKRQKNKGGE TVVLKLKDCP2340
 2341 SGEDFKTMMP ARYEDFLRSL PLPEYCNPEG KFNLASHLPG FFVRPDLGPR LCSAYGVAAA2400
 2401 KDHDIGTTNL HIEASDVVNV LVYVGIAKGN GVLSKAGILK KFEEEELDDI LRKRLKDSSE2460
 2461 IPGALWHIYA GKDVDKIREF LQKVSKEQGL EVLPEHDPVR DQGWYVNRRL RQRLLEEYGV2520
 2521 RACTLVQFLG DAIVLPAGTL HQVQNFHSCI QVTEDFVSPE HLVQSFHLTQ ELRLLKEEIN2580
 2581 YDDKLQVKNI LYHAVKEMVR ALKMHEDEVE DMEDT

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.85

Protein Overview: gi|109509427, gi...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: