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Protein Overview: gi|109502936

General Information:
Name(s) found: gi|109502936 [NCBI NR]
Description(s) found:
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  • gi|109502936|ref|XP_001078143.1| PREDICTED: similar to glypican 5 [Rattus norvegicus] [NCBI NR]
  • PREDICTED: similar to glypican 5 [Rattus norvegicus] [nr-271106-contam.fasta]
    • Organism: Rattus norvegicus
    Length: 718 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    proteinaceous extracellular matrix [IEA]
    Biological Process: NONE FOUND
    Molecular Function: heparan sulfate proteoglycan binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRKRSPASQ PQGFRGESEA LLGEAAVCSR SSRGRLRFEP SPDLARHHLP APPMLGAPES  60
   61 GDHSGEGATR TPRMDARTWR LGWRCLLLLA LLGSTRSEGV ESCEEVRKLF QWRLGGAVKG 120
  121 LPEAPRAGPD LQVCLSKNPT CCTRKMEEQY QIAAQQDLQQ VLQTSSSTLK LLISRNAAAF 180
  181 QETLETLIRQ AENYTSILFC NTYRNMALEA AASTQEFFTD VGLYLFGADV NPEEFVNRFF 240
  241 DSLFPLVYNH LINPGVTDSS LQYSECIRTA RQDVSPFGNI PKRVMGQMGR SLLPGRTFLQ 300
  301 ALNLGIEVIN TTDHIHFSKE CSRALLKMQY CPHCQSLTLS KPCMGYCLNV IRGCLAHMTD 360
  361 LNPHWHAYIR SLEELSDAMH GTYDVEHVLL NFHLLVNDAM LQAHLNAQKL LDQVNKICGL 420
  421 PVRTATQSPR CTFDPSKERH GMKISPRNGE ETLANRRKEF INSLRLHRSF YGGLADQLCV 480
  481 NEWAAAEGRP CWNGEDIVKS YAQRVVGNGV KAQSANPEVR VRGTDPVVNQ IIDKLKHVIQ 540
  541 LLQGRSPKPN KWELLHPGSG GGMLEQSSGD CDDEDGCGGS GSGEVKRTLK ITNWLPEHHS 600
  601 TSEVRHVHET ETGRSLSSRS VLGLFSLLAS LREGVRIPGQ SSASINYFQI FQIYYYYYYY 660
  661 YYYYYYYYYY YYYYYYYYYY YYYYYYYYYY YYYYYYYYYY YYYYYYYYYY YYYYYYYY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle