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Protein Overview: gi|109477625

General Information:
Name(s) found: gi|109477625 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|109477625|ref|XP_001072623.1| PREDICTED: similar to Msx2-interacting protein (SPEN homolog) (SMART/HDAC1-associated repressor protein) isoform 2 [Rattus norvegicus] [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 3634 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRETRHLWV GNLPENVREE KIIEHFKRYG RVESVKILPK RGSEGGVAAF VDFVDIKSAQ  60
   61 KAHNSVNKMG DRDLRTDYNE PGTIPSAARG LDDTVSIASR SREVSGFRGS GGGPAYGPPP 120
  121 SLHAREGRYE RRLDGASDNR ERAYEHSAYG HHERGTGAFD RTRHYDQDYY RDPRERTLQH 180
  181 GLYYTSRSRS PNRFDAHDPR YEPRAREQFT LPSVVHRDIY RDDLTREVRG RRPERNYQHS 240
  241 RSRSPHSSQS RNQSPQRLAS QASRPTRSPS GSGSRSRSSS SDSISSSSSS STDSSDSSST 300
  301 SSDDSPARSV QSAAVPAPTS QLLSSLEKDE PRKSFGIKVQ NLPVRSTDTS LKDGLFHEFK 360
  361 KFGKVTSVQI HGASEERYGL VFFRQQEDQE KALTASKGKL FFGMQIEVTA WVGPETESEN 420
  421 EFRPLDERID EFHPKATRTL FIGNLEKTTT YHDLRNIFQR FGEIVDIDIK KVNGVPQYAF 480
  481 LQYCDIASVC KAIKKMDGEY LGNNRLKLGF GKSMPTNCVW LDGLSSNVSD QYLTRHFCRY 540
  541 GPVVKVVFDR LKGLALVLYS EIEYAQAAVR ETKGRKIGGN KIKVDFANRE SQLAFYHCME 600
  601 KSGQDMRDFY EMLTERRPAK MARAPHVPFI CDVEFLYNCQ EERRGSYDYS QDRTYYENVR 660
  661 TPGAYPEDSR RDYPARGREL YSEWETYQGE YYESRYYDDP REYREYRSDP YEQDIREYSY 720
  721 RQRERERERE RFESDRDHER RPIERSQSPV HLRRPQSPGV SPAHSERLPS DSERRLYRRS 780
  781 SERSGSCSSV SPPRYDKLEK ARLERYTKNE KTDKERIFDA ERVERERRVI RKEKVEKDKP 840
  841 ERQKRKGKVH SPSSQSSETE QENDRDQSPE KPRASTKLSR DRTDKEGPAK NRLELVPCVV 900
  901 LTRVKEKEGK VIDHPPPEKL KARLAHDTAK SSVLDQKSQA SQVEPPKADS SKVDAARGKA 960
  961 LREKAFSSHA EVVDKEGRPK LRKHLKPEQA PELSALDLEK LEARKRRFAD SSLKVEKPRP1020
 1021 EVRKTSPEAE DTRALLKKQP DTPRDGILLR EGESERKPVR KEILKRESKK TKLERLNSTL1080
 1081 SPKDCQEPAA VSAGSGSRPS SDVHAALGEP VHGSVETQEA QPKKVMPSKP RLKQLQLLDS1140
 1141 QGPEKEEVRK NYCRLREDPV EHKAGQEKPH GVNAEEKLGI DIDHTQSYRK QMEQSRRKQQ1200
 1201 MEMEIAKSEK FGSPKKDVDE YERRSLVHEV GKPPQDVTDD SPPSKKRRTD HVDFDICTKR1260
 1261 ERNYRSSRQI SEDSERTSCS PGVHHGSFHE DDDPIGSPRL MSVKGSPRVD DKGLPYSNVA1320
 1321 VREDPFRCTP YDSGKREQAA DMAKIKLSVL SSEGEPNRWD PQMKQDPSRF DVSFPNSIIK1380
 1381 RDSLRKRCVR DLEPGEVPSD SDEDAEHRAQ SPRASSFYDS PRLSFLLRDR DHKLRDRDDR1440
 1441 LSSSLERNKF YSFALDKTIT PDTKALLERA KSLSSSREEN WSFLDWGSRF ANFRDNKDKE1500
 1501 KVDSAPRPIP SWYMKKKKIR TDSEGKLDDK KDEHREEEQE RQELFASRFL HSSIFEQDSR1560
 1561 RLQHLERKSE ESDFPPGRLY GRQASEGANS TSDSVQEPVV LFHSRFMELT RMQQKEKEKD1620
 1621 QKPKETEKQE GPETPKTPEP TTETKEPEPK APVSVALPAI TAVTPEPPPP AAAAEKAEET1680
 1681 SEAPSLAGER PEEPTPVLEE TKLVSEPPSE SVEQRKQVDL SPGKDSHDST AVVASTPPES1740
 1741 TTTDTVPCVD AEPLTPGTTV SQVESSADPK PSSPQPPSKL TQRCEEAEEP KVERPETTAS1800
 1801 IEPDATEKAE VVPEVQPPAS EDVEASPPVT AKDRKTTKSK RSKTSVPAAA ASIVEKPVTR1860
 1861 KSERIDREKM KRSSSPRGEA QKLLELKMEA DKVTRTASKS SGGDTEHPEP SLPLSRTRRR1920
 1921 NVRSVYATMG DHESRSPAKE PTEQPRVTRK RLERELQEAV VVPATPRRGR PPKTRRRVEE1980
 1981 GGEQERKEPA DTPRPAEGRR SPRSQKLAAT GGPQGKRGRN EHRAEAAEAT AQVSAREGNA2040
 2041 KARGDREAAS ETRRDRKDPS TDKDGPDIFP VEVERKPPEK TYKSKRGRAR STRSGMDRAA2100
 2101 HLKSLEMARQ AADKEAEPVA ASPEKNESPL EGSGVSPQLA DNPADPDKEA EKESVSASTV2160
 2161 SPEARQLTKQ MELQQAVENI AKLAEPSAAA ADKGTATATS EEPAAEDGHK PAHQASETEL2220
 2221 AAAIGSIISD SSGEPENFSA SPSVPPGSQT HLQEGMEPGP HEATPGILET EAATESSAQQ2280
 2281 ASASDPPAGS ADTKEARGNS SDSVQQAKEA KVAVTPPRKD KGRQKTTRSR RKRNVNKKVA2340
 2341 AATETRASEA EQPQSESPAA VVVAAAPPEE PQEEKQSEKP HSPLRECTSD PSKTPPAESL2400
 2401 SQENSVEEKT PCKTPAPPDL PPLSQPALVD DEPQARFKVH SIIESDPVTP PSDSSIPPPT2460
 2461 IPLVTIAKLP PPVIPGGVPH QSPPPKVTEW ITRQEEPRAQ SAPSPALPPD TKASDVDTSS2520
 2521 STLRKILMDP KYVSATGVTS TSVTAAIAEP VSAPRLQEAP APPCEPKRPS SEEKVAAAVP2580
 2581 HADTQASEVP VAADKEKVAP VIAPKITSVI SRMPVSIDLE NSQKITLAKP APQTLTGLVS2640
 2641 ALTGLVNVSL VPVNALKGPV KGSVATLKGL VSTPAGPVNL LKGPVNVLTG PVNVLTTPVS2700
 2701 ATVGTVSAAP GTVTAACGVT ATTGTAAMSG AVPAPAAKGK QRSSSNENSR FHPGSMSVID2760
 2761 DRPADTGSGA GLRVNTSEGV VLLSYSGQKT EGPQRISAKI SQIPPASAMD IEFQQSVSKS2820
 2821 QVKADSVTPT QAAPKGPQTP SAFANVAAHS TLVLTAQTYN ASPVISSVKT DRPSLEKPEP2880
 2881 IHLSVSTPVT QGGTVKVLTQ GINTPPVLVH NQLVLTPSIV TTNKKLADPV TLKIETKVLQ2940
 2941 PANLGPTLTP HHPPALPSKL PAEVNHVPSG PSNPADRTIA HLATTKPDTH SPRPTGPTPG3000
 3001 PFPRACHPSS TTSTALSTNA TVMLAAGIPV PQFISSIHPE QSVIMPPHSI TQTVSLGHLS3060
 3061 QGEVRMSTPT LPSITYSIRP ETLHSPRAPL QPQQIEARAP QRVSTPQPAT TAVPALATQH3120
 3121 PPEEEVHYHL PVARAAAPVQ SEVLVMQSEY RLHPYTVPRD VRIMVHPHVT AVSEQPRATE3180
 3181 GVVKVPPASK APQQLVKEVV KTSDAKAVPA PAPVPVPVPV PTPAPPPHGE ARILTVTPSS3240
 3241 QLQGLPLTPP VVVTHGVQIV HSSGELFQEY RYGDIRTYHA PAQLTHTQFP VASSINLPSR3300
 3301 TKTSAQGPPE SEPLQSTQPA QPAPSTQSTQ PVPPAPPCQP SQLSQPAQPP SGKIPQVSQE3360
 3361 AKGTQTGGIE QTRLPAMPTN RPSEPHAQAQ RAPGETPQPA HPSPVSVAMK PDLPTPLASQ3420
 3421 AAPKQPLFVP VNSGTSTPPG LALPHAEAQP APKQDSAPHG TPQRPVDMVQ LLKKYPIVWQ3480
 3481 GLLALKNDTA AVQLHFVSGN NVLAHRSLPL SEGGPPLRIA QRMRLEASQL EGVARRMTVE3540
 3541 TDYCLLLALP CGRDQEDVVS QTESLKAAFI TYLQAKQAAG IINVPNPGSN QPAYVLQIFP3600
 3601 PCEFSESHLS RLAPDLLASI SNISPHLMIV IASV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle