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Protein Overview: SEC13

General Information:
Name(s) found: SEC13 [HGNC (HUGO)]
Description(s) found:
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  • gi|60688273|gb|AAH91506.1| SEC13 homolog (S. cerevisiae) [Homo sapiens] [NCBI NR]
  • gi|50403748|sp|P55735.3|SEC13_HUMAN RecName: Full=Protein SEC13 homolog; AltName: Full=SEC13-related protein; AltName: Full=SEC13-like protein 1 [NCBI NR]
  • gi|34335134|ref|NP_899195.1| SEC13 protein isoform 1 [Homo sapiens] [NCBI NR]
  • gi|119584481|gb|EAW64077.1| SEC13-like 1 (S. cerevisiae), isoform CRA_a [Homo sapiens] [NCBI NR]
  • SEC13 homolog (S. cerevisiae) [HGNC (HUGO)]
  • Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3 [Swiss-Prot]
  • Hypothetical protein [hmr_yeast5_DM3-1_pombe.fasta]
  • SEC13-like 1 isoform b; SEC13-related protein [HMR_022704.fasta]
  • SEC13-like 1 isoform b; SEC13-related protein; SEC13 (S. cerevisiae)-like 1 [071204_hmrz_cont.fasta]
  • SEC13-like 1 isoform b [Homo sapiens]gi|50403748|sp|P55735|SC13_HUMAN SEC13-related protein (SEC13-like protein 1) [nrdb_11152004_Chlamydomonas]
  • SEC13-related protein (SEC13-like protein 1) [Yateslab_human_na_07-28-2006_reversed.fasta]
  • (NM_030673) SEC13 (S. cerevisiae)-like 1; SEC13-related protein [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • SEC13 protein [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • Tax_Id=9606 SEC13-like 1 isoform b [EBI-IPI_human_3.04_03-07-2005_reverse.fasta]
  • SEC13-like 1 isoform b; SEC13-related protein; SEC13 (S. cerevisiae)-like 1 [Homo sapiens] [HumanGallus06162005.fasta]
  • SEC13-like 1 isoform b [Homo sapiens] [human-contam-plus-rand.fasta]
  • SEC13-like 1 isoform b; SEC13-related protein [Homo sapiens] [human-NCBI-042104-rand.fasta]
  • Tax_Id=9606 Hypothetical protein [EBI-IPI_Drosophila_na_12-13-2007_con_reversed.fasta]
  • Protein SEC13 homolog (SEC13-related protein) (SEC13-like protein 1) [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • SEC13-like 1 (S. cerevisiae), isoform CRA_a [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • SEC13 homolog (S. cerevisiae) [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 SEC13-LIKE 1 ISOFORM B [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • SEC13 protein isoform 1 [Homo sapiens] [NCBI-RefSeq_human-rat_na_04-07-2009_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=SEC13 Protein SEC13 homolog [human-ipi-250309-contam.fasta]
  • IPI:IPI00479141.2|SWISS-PROT:P55735|ENSEMBL:ENSP00000312122|REFSEQ:NP_899195|VEGA:OTTHUMP00000158854;OTTHUMP00000170219 Tax_Id=9606 Gene_Symbol=SEC13 Protein SEC13 homolog [ipi.HUMAN.fasta.20090807]
  • Tax_Id=9606 SEC13-related protein [IPI_human_3.26.fasta]
  • [human_BMb_040710_contam.fasta]
  • protein SEC13 homolog isoform 1 [Homo sapiens] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • P55735;Q5BJF0;Q9BRM6;Q9BUG7; RecName: Full=Protein SEC13 homolog; AltName: Full=SEC13-related protein; AltName: Full=SEC13-like protein 1; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • Protein SEC13 homolog OS=Homo sapiens GN=SEC13 [011711_HMR.fasta]
  • GeneSymbol=SEC13 Synonyms=D3S1231E|SEC13L1|SEC13R|npp-20 protein SEC13 homolog isoform 1 [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • IPI:IPI00479141.2|SWISS-PROT:P55735|TREMBL:A4UCS7|ENSEMBL:ENSP00000312122|REFSEQ:NP_899195|VEGA:OTTHUMP00000158854 Tax_Id=9606 Gene_Symbol=SEC13 Protein SEC13 homolog [ipi.HUMAN.20110912.fasta]
  • Protein SEC13 homolog GN=SEC13 [Doctor+uniprot-HUMAN-120911.fasta]
    • Organism: Homo sapiens
    Length: 322 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSVINTVDT SHEDMIHDAQ MDYYGTRLAT CSSDRSVKIF DVRNGGQILI ADLRGHEGPV  60
   61 WQVAWAHPMY GNILASCSYD RKVIIWREEN GTWEKSHEHA GHDSSVNSVC WAPHDYGLIL 120
  121 ACGSSDGAIS LLTYTGEGQW EVKKINNAHT IGCNAVSWAP AVVPGSLIDH PSGQKPNYIK 180
  181 RFASGGCDNL IKLWKEEEDG QWKEEQKLEA HSDWVRDVAW APSIGLPTST IASCSQDGRV 240
  241 FIWTCDDASS NTWSPKLLHK FNDVVWHVSW SITANILAVS GGDNKVTLWK ESVDGQWVCI 300
  301 SDVNKGQGSV SASVTEGQQN EQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run gi|14317902, gi|... No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..322] PSI-BLAST 40.69897 No description for 2pm6B was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle