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Protein Overview: gi|113565698, gi...

General Information:
Name(s) found: gi|115461054 [NCBI NR]
gi|113565698 [NCBI NR]
Description(s) found:
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  • gi|115461054|ref|NP_001054127.1| Os04g0658100 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113565698|dbj|BAF16041.1| Os04g0658100 [Oryza sativa Japonica Group] [NCBI NR]
  • Os04g0658100 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 428 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMVREEAWP LAAPQQQQQQ PSAPPPQPQA QQQNGRIDLR EVKLQLEKRL GPDRSRRYFS  60
   61 YLKGYLSNRL SKADFDKVCL QTLGRENLRV HNQLIRSVLY NAYHAKCPPP TPAPDVGRSV 120
  121 GATVKKVCQP GEALNSCNGD IRLLQMQGSR HMSTMQDHQS KDRMKSTGLS CRVDASANHS 180
  181 QITHGGAAVP ENGTLSSSDL KRSVHFQHES AEPLAKHQRV EQSPTGNIIK LRRSMSNVSD 240
  241 HSAEASNSPV RAPLGIPFCS ASVGGARKLP PPLISAGEDH CTSCCEHREL LNTEALHRRM 300
  301 EKTAESLGLA GVTLDCADLL NNGLDKYLKN LIRSSVELIG ANVQSDARKG ELYKQHAYGK 360
  361 HMNGVWLPNH VQMQSGSGPS GATNDIRNHH LISLDDFKVA MQLNPQQLGE DWPVLLEKIC 420
  421 LCSPEEND

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] MSA 8.033991 View MSA. No confident structure predictions are available.
    2 View Details [128..287] deduced N/A No confident structure predictions are available.
    3 View Details [288..428] FFAS03 1.16 TAF(II)-135, (TAF(II)-130, hTAF4), histone fold domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.455107270213523 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle