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Protein Overview: gi|215740552, gi...

General Information:
Name(s) found: gi|215740552 [NCBI NR]
gi|115458578 [NCBI NR]
gi|113564460 [NCBI NR]
Description(s) found:
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  • gi|215740552|dbj|BAG97208.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115458578|ref|NP_001052889.1| Os04g0443500 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113564460|dbj|BAF14803.1| Os04g0443500 [Oryza sativa Japonica Group] [NCBI NR]
  • Os04g0443500 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 343 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPAPLASLQ EEGEGEPGES PSSAAAAVPP RPATHHSLHK YAPLDWSAYF DEERRVAIPD  60
   61 TEDVFNVYMA RSEGPVVFCL HGGGYSGLSF ALAASRMKEK ARVVSMDLRG HGKSTTSDDS 120
  121 DLSIETLSSD VIAVLRTLYG DSPPAIILVG HSMGGSVAIH VAAKKVIRNL HGLVVIDVVE 180
  181 GTAMASLIHM QKILANRAQH FPSIEKAIEW SVKGGPLRNI DSARVSIPST LKYDESRECY 240
  241 TYRTPLEETE KYWKGWYEGL SEKFLSCPVQ KVLLLAGTDR LDRALTIGQM QGKFQMVVVR 300
  301 HTGHAIQEDV PEEFASHILN FIARNKIGPN GVEIPGLIKK WQH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..343] PSI-BLAST 44.69897 Epoxide hydrolase, N-terminal domain; Mammalian epoxide hydrolase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.36321860321357 bayes_pls_golite062009
  • hydrolase activity
    		•  1.1444670166202 bayes_pls_golite062009
  • binding
    		•  0.386006007682309 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle