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Protein Overview: gi|113564384, gi...

General Information:
Name(s) found: gi|115458426 [NCBI NR]
gi|113564384 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|115458426|ref|NP_001052813.1| Os04g0429800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113564384|dbj|BAF14727.1| Os04g0429800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 563 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVAGSASA GANGSAAAHR VGAPTNPMAT ALLTDQYQFS MAYAYWKAGK HADRAVFDLY  60
   61 FRKNPFGGEF TVFAGLEECI KFIANFKFTE DDILFLQSVM PMCEDAFFDY LRKTDCSDVE 120
  121 VYSIPEGSVV FPKVPLMRVE GPVAVVQLLE TPFVNLINYA SLVTTNAARH RHVAGKSKVL 180
  181 LEFGLRRAQG PDGAISASKY CFMGGFDATS NVLAGNLFGI PLRGTHSHAY VSSYMSLDEI 240
  241 PDKSLKSKDG SRVCKDFVSL VKEWLQKIQL ADSLCGVFGE TNQSELAAFA SYALAFPTIF 300
  301 LALVDTYDVM RSGIPNFCAV ALALHDLGYK ASGIRLDSGD LAYLSIEARK VFRTLEKEFN 360
  361 VPAFGKMIIT ASNDLNEETI DALNKQGHEV DSFGIGTYLV TCYSQAALGC VFKLVEINSR 420
  421 PRIKLSEDVA KVSIPCKKRC FRLYGKEGYP LVDIMMRESE PSPKAGERIL CRHPFLESKR 480
  481 AYVVPQHVEE LLQCYWPGTS NKPRVELPSL EEIRGRCMQQ LEKLRPDHIR RLNPTPYKVS 540
  541 VSAKLYEFIH SLWLNEAPVG ELQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..563] PSI-BLAST 139.0 Crystal structure of Enterococcus faecalis putative nicotinate phosphoribosyltransferase, NEW YORK STRUCTURAL GENOMICS CONSORTIUM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nicotinate phosphoribosyltransferase activity
    		•  6.27751846600304 bayes_pls_golite062009
  • nicotinate-nucleotide diphosphorylase (carboxylating) activity
    		•  3.12788282156037 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  1.28938930256604 bayes_pls_golite062009
  • binding
    		•  0.653855264785782 bayes_pls_golite062009
  • catalytic activity
    		•  0.60409960326459 bayes_pls_golite062009
  • protein binding
    		•  0.317577842532028 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle