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Protein Overview: gi|113536660, gi...

General Information:
Name(s) found: gi|215768784 [NCBI NR]
gi|115446699 [NCBI NR]
gi|113536660 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|215768784|dbj|BAH01013.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115446699|ref|NP_001047129.1| Os02g0556400 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113536660|dbj|BAF09043.1| Os02g0556400 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 480 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWYLCVFYHR LLDYRRPEVQ SLAELFGGPG AGDAVEWRMP ENHHVDSPFH LVRLPGDERL  60
   61 AAQIANRSLL VKGIYELWGQ GTTYEELERV VMAYPEERKL PYLTPESTFK IVVDSFGKVI 120
  121 SFQEQNDIMK SLTYIPFKGR VNLKKPDHKF FVMETDDYGC NNGLPPVAQR TVFFGREVGA 180
  181 ADRHLLPTYQ LKSRKYIGPT AMDAEMAFLM ANQGLARPGK LVYDPFVGTG SILVAAAHFG 240
  241 AMTMGADIDI RVVRDGRGPD CNIWSNFEQY KLPEPLCILR ADNNVPPWRP GLKEVFDAII 300
  301 CDPPYGVRAG GRKSGGRKLI KGTVAPYTVP DEKRDSHIPS TAPYSLAECV HDLLHLAARM 360
  361 LVMGGRLVFF FPVVREDGVA NPAKYPEHPC FRLLASCEQI LSMRYSRVLL TMVKVGPYTE 420
  421 EVEKAAEERR REFRENHHKW MEEGNLHSAV FSPADQAAAA ADGKPAIDRD SKPKYRGKYV 480
  481

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..74] PSI-BLAST 45.221849 Crystal Structure of PH1915 (APC 5817): A Hypothetical RNA Methyltransferase
    2 View Details [75..480] PSI-BLAST 41.522879 No description for 2okcA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • methyltransferase activity
    		•  4.15445027778357 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  4.07153733729662 bayes_pls_golite062009
  • N-methyltransferase activity
    		•  3.39676833658685 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  3.39429041855776 bayes_pls_golite062009
  • protein methyltransferase activity
    		•  3.33061049943022 bayes_pls_golite062009
  • RNA methyltransferase activity
    		•  3.07428840534971 bayes_pls_golite062009
  • rRNA methyltransferase activity
    		•  2.29640050660273 bayes_pls_golite062009
  • histone methyltransferase activity
    		•  2.22830304942698 bayes_pls_golite062009
  • transferase activity
    		•  2.22303238506686 bayes_pls_golite062009
  • tRNA methyltransferase activity
    		•  1.95598912777096 bayes_pls_golite062009
  • arginine N-methyltransferase activity
    		•  1.89831891552024 bayes_pls_golite062009
  • protein-arginine N-methyltransferase activity
    		•  1.89831891552024 bayes_pls_golite062009
  • DNA-methyltransferase activity
    		•  1.63765148226572 bayes_pls_golite062009
  • histone-arginine N-methyltransferase activity
    		•  1.30685781453463 bayes_pls_golite062009
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • tRNA (cytosine)-methyltransferase activity
    		•  1.23470195121524 bayes_pls_golite062009
  • tRNA (cytosine-5-)-methyltransferase activity
    		•  1.23470195121524 bayes_pls_golite062009
  • tRNA (adenine)-methyltransferase activity
    		•  0.957389257385645 bayes_pls_golite062009
  • tRNA (adenine-N1-)-methyltransferase activity
    		•  0.957389257385645 bayes_pls_golite062009
  • protein-arginine omega-N monomethyltransferase activity
    		•  0.950437293690352 bayes_pls_golite062009
  • site-specific DNA-methyltransferase (adenine-specific) activity
    		•  0.703178429468566 bayes_pls_golite062009
  • rRNA (adenine) methyltransferase activity
    		•  0.533090627724779 bayes_pls_golite062009
  • rRNA (adenine-N6,N6-)-dimethyltransferase activity
    		•  0.455449410561251 bayes_pls_golite062009
  • histone methyltransferase activity (H4-R3 specific)
    		•  0.421039991390153 bayes_pls_golite062009
  • protein-arginine omega-N asymmetric methyltransferase activity
    		•  0.40782425952463 bayes_pls_golite062009
  • tRNA (guanine) methyltransferase activity
    		•  0.203168546434167 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle