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Protein Overview: dyf-6

General Information:
Name(s) found: dyf-6 / CE40388 [WormBase]
Description(s) found:
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  • WBGene00001122 locus:dyf-6 status:Confirmed UniProt:Q0G838 protein_id:CAL36517.1 [WormBase]
  • gi|133901982|ref|NP_001076767.1| abnormal DYe Filling family member (dyf-6) [Caenorhabditis elegans] [NCBI NR]
  • gi|112982594|emb|CAL36517.1| C. elegans protein F46F6.4a, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • CE40388 WBGene00001122 locus:dyf-6 status:Confirmed UniProt:Q0G838_CAEEL protein_id:CAL36517.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE40388 WBGene00001122 locus:dyf-6 status:Confirmed UniProt:Q0G838_CAEEL protein_id:CAL36517.1| [wormORF-contam.fasta]
  • Hypothetical protein F46F6.4a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE40388 WBGene00001122 locus:dyf-6 status:Confirmed TR:Q0G838 protein_id:CAL36517.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE40388 WBGene00001122 locus:dyf-6 status:Confirmed UniProt:Q0G838 protein_id:CAL36517.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=dyf-6 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 471 amino acids

    Gene Ontology:
    Cellular Component: dendrite [IDA]
    neuronal cell body [IDA]
    Biological Process: sensory cilium assembly [IMP]
    intraflagellar transport [IDA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSETTAPMI INEKSSLPVK SEPGQLGNPI SDESSEDEQS QIRALEEDQG IYYNEEVVAS  60
   61 PKNESDDDIP LRRIQLSHQT STQQHPEDSE PQEVIDVNDI ELPAGEAQPN MERRRSVRFS 120
  121 GRHDEEEDGR NKHFRTPSPE SLRYIQALEN PMAANGEFEE EFNDLADPQV QPPPMGSPPA 180
  181 YTSADEGPKT PPPRASAGSN MRQESMNELI MRKISDPLQN LIRRASRLED DSSNDDDDDD 240
  241 DDEDDDYTED EIAILTYIDA YKTQEVELRP QLRPFTIEYI PAMGDVDLFI KVPRPDEIDD 300
  301 NVGLTQIDEP PSNQSDATIV DMQIRNATKD AAILDDDVPV KLLERADENP DEIKKWISDI 360
  361 KEFHKSKPAQ TVHYRTQLPD VETLMQEWPQ KLEEVLKTTK IPSAELDVSL EKYVEICLNI 420
  421 VDIPVGKSRI EALHLMFSLL NEFNNSQHFR NLAQNNNLGG ETGETMDRLE L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..150] MSA 1.005937 View MSA. No confident structure predictions are available.
    2 View Details [151..233] deduced N/A No confident structure predictions are available.
    3 View Details [234..377] MSA 2.024948 View MSA. No confident structure predictions are available.
    4 View Details [378..471] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle