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Protein Overview: CE40385

General Information:
Name(s) found: CE40385 [WormBase]
Description(s) found:
Found 11 descriptions.
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  • WBGene00008927 locus:snx-17 status:Partially_confirmed UniProt:Q0G826 protein_id:CAL36496.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 476 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cell communication [IEALink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]
    phosphoinositide binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIHVDVPDTK TLVERSDGIT KYTAYNIHIN GWYHGSVRFS HLYEFAELIK QKFSQRYKGP  60
   61 EFPAKKLFKL DPKAIDERRQ KITKYFQALV QHPEVARHYL VEKKLLGFQI DSFRATSQYV 120
  121 TLDVFLGNGE KTTIKCLVSD STLEIMKIIC EKLGFKNKDQ FIYHFGLFMA KGRDPTNACY 180
  181 SVTTENFNPL LTRFLRNFEA PFVSLSTANQ KYNENGHYHF LCLRKLIWDS RVEEPLLDDG 240
  241 NFVELLYKQA MQDYKNGHMD PVKEDLDSKL KSCMARNDSK MFLRTCHQLS TYSYEIMSPC 300
  301 SCDYPKPGTP CEIKFGRRQI IMTTRDETGK PKPSIFRATR IRVWRITQVM DKISFQFEYL 360
  361 MAKDTFEWIT LDTDQSILMS LLLQSIGSEI LYEHNNMTIE QQVMKEKHSK GNYVEKSEKL 420
  421 PRDPKKPIIV LKNEVEDTDP LGVMEHYHNY NRMLTTISDG IPQRNQAFTD ITNDDL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..287] PSI-BLAST 32.39794 No description for 2dybA was found.
    2 View Details [288..396] PSI-BLAST 23.154902 Talin
    3 View Details [397..476] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle