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Protein Overview: dnj-27

General Information:
Name(s) found: dnj-27 / CE40162 [WormBase]
Description(s) found:
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  • WBGene00001045 locus:dnj-27 status:Partially_confirmed UniProt:Q25AR9 protein_id:CAJ85780.1 [WormBase]
  • gi|90185984|emb|CAJ85780.1| C. elegans protein Y47H9C.5b, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|115532380|ref|NP_001040705.1| DNaJ domain (prokaryotic heat shock protein) family member (dnj-27) [Caenorhabditis elegans] [NCBI NR]
  • CE40162 WBGene00001045 locus:dnj-27 status:Partially_confirmed UniProt:Q25AR9_CAEEL protein_id:CAJ85780.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE40162 WBGene00001045 locus:dnj-27 status:Partially_confirmed UniProt:Q25AR9_CAEEL protein_id:CAJ85780.1| [wormORF-contam.fasta]
  • CE40162 WBGene00001045 locus:dnj-27 status:Partially_confirmed TR:Q25AR9 protein_id:CAJ85780.1 [wormpep160-contam.fasta]
  • DNaJ domain (prokaryotic heat shock protein) family member (dnj-27) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y47H9C.5b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE40162 WBGene00001045 locus:dnj-27 status:Partially_confirmed UniProt:Q25AR9 protein_id:CAJ85780.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • Isoform of Q9XWE1, DNaJ domain (Prokaryotic heat shock protein) OS=Caenorhabditis elegans GN=dnj-27 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 318 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IEALink to PubMed article]
    Biological Process: response to heat [IEALink to PubMed article]
    glycerol ether metabolic process [IEALink to PubMed article]
    cell redox homeostasis [IEALink to PubMed article]
    protein folding [IEALink to PubMed article]
    Molecular Function: heat shock protein binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    protein disulfide oxidoreductase activity [IEALink to PubMed article]
    electron carrier activity [IEALink to PubMed article]
    unfolded protein binding [IEALink to PubMed article]
    isomerase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLGEYRRF HTATSEDSML HTVAIGSLDC VKYKDLCQQA GVQSYPTSIV YTPDGKTHKM  60
   61 VGYHNVDYIL EFLDNSLNPS VMEMSPEQFE ELVMNRKDEE TWLVDFFAPW CGPCQQLAPE 120
  121 LQKAARQIAA FDENAHVASI DCQKYAQFCT NTQINSYPTV RMYPAKKTKQ PRRSPFYDYP 180
  181 NHMWRNSDSI QRWVYNFLPT EVVSLGNDFH TTVLDSSEPW IVDFFAPWCG HCIQFAPIYD 240
  241 QIAKELAGKV NFAKIDCDQW PGVCQGAQVR AYPTIRLYTG KTGWSRQGDQ GIGIGTQHKE 300
  301 QFIQIVRQQL KLDEHDEL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] PSI-BLAST 8.522879 Protein disulfide isomerase, PDI
    2 View Details [80..318] PSI-BLAST 22.0 Crystal Structure of Yeast Protein Disulfide Isomerase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.142133664747919 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle